RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 TAOK3Q9H2K8 898 aa2.82□□□□□ -1.96
BRCA2-205ENST00000533776 NDST4Q9H3R1 872 aa2.82□□□□□ -1.96
BRCA2-205ENST00000533776 FKRPQ9H9S5 495 aa2.82□□□□□ -1.96
BRCA2-205ENST00000533776 BPIFA1Q9NP55 256 aa2.82□□□□□ -1.96
BRCA2-205ENST00000533776 MAP3K20Q9NYL2 800 aaKnown RBP2.82□□□□□ -1.96
BRCA2-205ENST00000533776 DLGAP4Q9Y2H0 992 aa2.82□□□□□ -1.96
BRCA2-205ENST00000533776 FAM96BQ9Y3D0 163 aa2.82□□□□□ -1.96
BRCA2-205ENST00000533776 LOXL2Q9Y4K0 774 aa2.82□□□□□ -1.96
BRCA2-205ENST00000533776 BLOC1S5-TXNDC5H3BN57 136 aa2.81□□□□□ -1.96
BRCA2-205ENST00000533776 CRLF1O75462 422 aa2.81□□□□□ -1.96
BRCA2-205ENST00000533776 MAOAP21397 527 aa2.81□□□□□ -1.96
BRCA2-205ENST00000533776 CNTFP26441 200 aa2.81□□□□□ -1.96
BRCA2-205ENST00000533776 BDKRB2P30411 391 aa2.81□□□□□ -1.96
BRCA2-205ENST00000533776 KRT2P35908 639 aa2.81□□□□□ -1.96
BRCA2-205ENST00000533776 TERF1P54274 439 aa2.81□□□□□ -1.96
BRCA2-205ENST00000533776 BIRC3Q13489 604 aa2.81□□□□□ -1.96
BRCA2-205ENST00000533776 ZRSR2Q15696 482 aaKnown RBP2.81□□□□□ -1.96
BRCA2-205ENST00000533776 C2orf68Q2NKX9 166 aa2.81□□□□□ -1.96
BRCA2-205ENST00000533776 CCNYL2Q5T2Q4 361 aa2.81□□□□□ -1.96
BRCA2-205ENST00000533776 SFMBT2Q5VUG0 894 aa2.81□□□□□ -1.96
BRCA2-205ENST00000533776 LINGO2Q7L985 606 aa2.81□□□□□ -1.96
BRCA2-205ENST00000533776 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.81□□□□□ -1.96
BRCA2-205ENST00000533776 LSM14AQ8ND56 463 aaKnown RBP2.81□□□□□ -1.96
BRCA2-205ENST00000533776 MAPK1IP1LQ8NDC0 245 aa2.81□□□□□ -1.96
BRCA2-205ENST00000533776 GCC1Q96CN9 775 aa2.81□□□□□ -1.96
BRCA2-205ENST00000533776 ST6GAL2Q96JF0 529 aa2.81□□□□□ -1.96
BRCA2-205ENST00000533776 PPP1R3EQ9H7J1 279 aa2.81□□□□□ -1.96
BRCA2-205ENST00000533776 GPR108Q9NPR9 543 aa2.81□□□□□ -1.96
BRCA2-205ENST00000533776 RRN3Q9NYV6 651 aa2.81□□□□□ -1.96
BRCA2-205ENST00000533776 LUZP4Q9P127 313 aa2.81□□□□□ -1.96
BRCA2-205ENST00000533776 FBXO9Q9UK97 447 aaPredicted RBP2.81□□□□□ -1.96
BRCA2-205ENST00000533776 TTC7AQ9ULT0 858 aaPredicted RBP2.81□□□□□ -1.96
BRCA2-205ENST00000533776 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.81□□□□□ -1.96
BRCA2-205ENST00000533776 LSM4Q9Y4Z0 139 aaKnown RBP2.81□□□□□ -1.96
BRCA2-205ENST00000533776 SMIM1B2RUZ4 78 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 PCDH7O60245 1069 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 TSPAN3O60637 253 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 BAG4O95429 457 aaKnown RBP2.8□□□□□ -1.96
BRCA2-205ENST00000533776 MT-CYBP00156 380 aaPredicted RBP2.8□□□□□ -1.96
BRCA2-205ENST00000533776 POLBP06746 335 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 HEXAP06865 529 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 HSD3B1P14060 373 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 CHRNB4P30926 498 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 SHMT1P34896 483 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 DCTP40126 519 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 MAPK9P45984 424 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 METAP2P50579 478 aaKnown RBP eCLIP2.8□□□□□ -1.96
BRCA2-205ENST00000533776 CCR5P51681 352 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 EFNA5P52803 228 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 EFNB1P98172 346 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 UBE3AQ05086 875 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 EFR3AQ14156 821 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 PPP2R5BQ15173 497 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 LPAL2Q16609 132 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 KRT24Q2M2I5 525 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 MAP3K21Q5TCX8 1036 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 ATG16L1Q676U5 607 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 HIST2H2BDQ6DRA6 164 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 FAM171BQ6P995 826 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 SLC27A1Q6PCB7 646 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 C15orf39Q6ZRI6 1047 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 LRRTM4Q86VH4 590 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 ZNF354CQ86Y25 554 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 SPATA6LQ8N4H0 392 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 PLD5Q8N7P1 536 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 STPG4Q8N801 248 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 USP38Q8NB14 1042 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 MYRIPQ8NFW9 859 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 HUS1BQ8NHY5 278 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 TM9SF4Q92544 642 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 STAMBPL1Q96FJ0 436 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 UBXN10Q96LJ8 280 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 PHF7Q9BWX1 381 aaPredicted RBP2.8□□□□□ -1.96
BRCA2-205ENST00000533776 HEMGNQ9BXL5 484 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 TTYH1Q9H313 450 aaPredicted RBP2.8□□□□□ -1.96
BRCA2-205ENST00000533776 MMP25Q9NPA2 562 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 SLC52A3Q9NQ40 469 aa2.8□□□□□ -1.96
BRCA2-205ENST00000533776 ZNF624Q9P2J8 865 aaPredicted RBP2.8□□□□□ -1.96
BRCA2-205ENST00000533776 KIAA1210Q9ULL0 1709 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 IGLV5-45A0A087WSX0 123 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 TACC1O75410 805 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 GALTP07902 379 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 DDX5P17844 614 aaKnown RBP2.79□□□□□ -1.96
BRCA2-205ENST00000533776 ZNF10P21506 573 aaPredicted RBP2.79□□□□□ -1.96
BRCA2-205ENST00000533776 PGM1P36871 562 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 CCT5P48643 541 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 RAD23BP54727 409 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 EEF1A1P68104 462 aaKnown RBP2.79□□□□□ -1.96
BRCA2-205ENST00000533776 SORDQ00796 357 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 ZNF234Q14588 700 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 NFIL3Q16649 462 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 WDR45BQ5MNZ6 344 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 EEF1A1P5Q5VTE0 462 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 DUS1LQ6P1R4 473 aaKnown RBP2.79□□□□□ -1.96
BRCA2-205ENST00000533776 CPLX2Q6PUV4 134 aaKnown RBP2.79□□□□□ -1.96
BRCA2-205ENST00000533776 SLC22A25Q6T423 547 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 CYP26C1Q6V0L0 522 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 ATF7IPQ6VMQ6 1270 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 RAD9BQ6WBX8 426 aa2.79□□□□□ -1.96
BRCA2-205ENST00000533776 BBS12Q6ZW61 710 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms