RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 FERD3LQ96RJ6 166 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 TSPAN16Q9UKR8 245 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 CCNB2O95067 398 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 ZSCAN5DPP0CG00 497 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 HNRNPLP14866 589 aaKnown RBP eCLIP13.66□□□□□ -0.22
LRRK1-202ENST00000525284 POLR2EP19388 210 aaKnown RBP13.66□□□□□ -0.22
LRRK1-202ENST00000525284 CSTF1Q05048 431 aaKnown RBP13.66□□□□□ -0.22
LRRK1-202ENST00000525284 ILF2Q12905 390 aaKnown RBP13.66□□□□□ -0.22
LRRK1-202ENST00000525284 SNAPC2Q13487 334 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 RAET1GQ6H3X3 334 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 TAPT1Q6NXT6 567 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 ZCCHC12Q6PEW1 402 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 GALNT7Q86SF2 657 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 OR52J3Q8NH60 311 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 CIB1Q99828 191 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 PLEKHG2Q9H7P9 1386 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 SEMA3GQ9NS98 782 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 PCDHA11Q9Y5I1 949 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 H7C2Y5 167 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 CLPXO76031 633 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 CSF1RP07333 972 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 NAMPTP43490 491 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 FXR2P51116 673 aaKnown RBP eCLIP13.66□□□□□ -0.22
LRRK1-202ENST00000525284 ERVK-9P63128 1117 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 HAGHLQ6PII5 290 aaPredicted RBP13.66□□□□□ -0.22
LRRK1-202ENST00000525284 LNX2Q8N448 690 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 GSTCDQ8NEC7 633 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 BAP1Q92560 729 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 COMMD4Q9H0A8 199 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 RC3H2Q9HBD1 1191 aaKnown RBP13.66□□□□□ -0.22
LRRK1-202ENST00000525284 MED31Q9Y3C7 131 aa13.66□□□□□ -0.22
LRRK1-202ENST00000525284 ZFYVE16Q7Z3T8 1539 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 RIIAD1A6NNX1 92 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 CYP17A1P05093 508 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 CYP11B2P19099 503 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 CD83Q01151 205 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 SCUBE3Q8IX30 993 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 HIST1H2AAQ96QV6 131 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 COMMD3Q9UBI1 195 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 CDH7Q9ULB5 785 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 MADDQ8WXG6 1647 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 PTCH1Q13635 1447 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 STMND1H3BQB6 276 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 SNX3O60493 162 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 ZNF14P17017 642 aaPredicted RBP13.65□□□□□ -0.22
LRRK1-202ENST00000525284 MTA1Q13330 715 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 SYCE2Q6PIF2 218 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 UNC5AQ6ZN44 842 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 THAP5Q7Z6K1 395 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 P2RY8Q86VZ1 359 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 MCOLN2Q8IZK6 566 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 ACOT12Q8WYK0 555 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 PHB2Q99623 299 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 MOCS1Q9NZB8 636 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 FBXO9Q9UK97 447 aaPredicted RBP13.65□□□□□ -0.22
LRRK1-202ENST00000525284 PEX16Q9Y5Y5 336 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 ATP7BP35670 1465 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 GRXCR2A6NFK2 248 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 MICAL2O94851 1124 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 POMCP01189 267 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 ABL2P42684 1182 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 PPP3CAQ08209 521 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 SLC10A7Q0GE19 358 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 BATFQ16520 125 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 CRELD2Q6UXH1 353 aaPredicted RBP13.65□□□□□ -0.22
LRRK1-202ENST00000525284 ZNF782Q6ZMW2 699 aaPredicted RBP13.65□□□□□ -0.22
LRRK1-202ENST00000525284 LPAR1Q92633 364 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 RDH8Q9NYR8 311 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 TMEM2Q9UHN6 1383 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 CLDN25C9JDP6 229 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 SERPINA4P29622 427 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 PITPNAQ00169 270 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 DPYSQ14117 519 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 MTFR2Q6P444 385 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 POLR1EQ9GZS1 481 aaKnown RBP13.65□□□□□ -0.22
LRRK1-202ENST00000525284 ETNK2Q9NVF9 386 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 TVP23AA6NH52 213 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 PDCD5O14737 125 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 AURKAO14965 403 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 IPO13O94829 963 aaKnown RBP13.65□□□□□ -0.22
LRRK1-202ENST00000525284 LINGO3P0C6S8 592 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 STOMP27105 288 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 HOXC12P31275 282 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 KLHL26Q53HC5 615 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 SNAP47Q5SQN1 464 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 GTF2IRD2BQ6EKJ0 949 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 GTF2IRD2Q86UP8 949 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 LAPTM4BQ86VI4 370 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 DNASE1L2Q92874 299 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 SPON1Q9HCB6 807 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 C11orf16Q9NQ32 467 aa13.65□□□□□ -0.22
LRRK1-202ENST00000525284 AVILO75366 819 aa13.64□□□□□ -0.23
LRRK1-202ENST00000525284 PSMB4P28070 264 aa13.64□□□□□ -0.23
LRRK1-202ENST00000525284 SCGB2B2Q4G0G5 96 aa13.64□□□□□ -0.23
LRRK1-202ENST00000525284 ZYG11AQ6WRX3 759 aa13.64□□□□□ -0.23
LRRK1-202ENST00000525284 FAM83AQ86UY5 434 aa13.64□□□□□ -0.23
LRRK1-202ENST00000525284 CFAP206Q8IYR0 622 aa13.64□□□□□ -0.23
LRRK1-202ENST00000525284 C1orf216Q8TAB5 229 aa13.64□□□□□ -0.23
LRRK1-202ENST00000525284 CSGALNACT1Q8TDX6 532 aa13.64□□□□□ -0.23
LRRK1-202ENST00000525284 SMURF1Q9HCE7 757 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms