RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 FIZ1Q96SL8 496 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 WDR83Q9BRX9 315 aaKnown RBP3.18□□□□□ -1.9
CSDE1-208ENST00000524652 FGFBP2Q9BYJ0 223 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 TRIM2Q9C040 744 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 CCSER1Q9C0I3 900 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 RBM38Q9H0Z9 239 aaKnown RBP3.18□□□□□ -1.9
CSDE1-208ENST00000524652 TRPV6Q9H1D0 765 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 SMARCAD1Q9H4L7 1026 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 CDCP1Q9H5V8 836 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 C11orf49Q9H6J7 331 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 DHX33Q9H6R0 707 aaKnown RBP3.18□□□□□ -1.9
CSDE1-208ENST00000524652 TUFT1Q9NNX1 390 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 STARD7Q9NQZ5 370 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 ERAP1Q9NZ08 941 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 TCEAL9Q9UHQ7 104 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 CFAP45Q9UL16 551 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 SNX13Q9Y5W8 968 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 TSC2P49815 1807 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 MYO9BQ13459 2157 aa3.18□□□□□ -1.9
CSDE1-208ENST00000524652 TEP1Q99973 2627 aaKnown RBP3.18□□□□□ -1.9
CSDE1-208ENST00000524652 DCHS1Q96JQ0 3298 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 ZNF318Q5VUA4 2279 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 ANKRD17O75179 2603 aaKnown RBP3.17□□□□□ -1.9
CSDE1-208ENST00000524652 COL1A2P08123 1366 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 C17orf102A2RUQ5 167 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 OR2W5A6NFC9 320 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 POLR2DO15514 142 aaKnown RBP3.17□□□□□ -1.9
CSDE1-208ENST00000524652 KLRC4O43908 158 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 HBP1O60381 514 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 USO1O60763 962 aaKnown RBP3.17□□□□□ -1.9
CSDE1-208ENST00000524652 PQBP1O60828 265 aaKnown RBP3.17□□□□□ -1.9
CSDE1-208ENST00000524652 CSDE1O75534 798 aaKnown RBP3.17□□□□□ -1.9
CSDE1-208ENST00000524652 CHRNA1P02708 482 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 IQCF3P0C7M6 154 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 PLA2G4BP0C869 781 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 CYP11B2P19099 503 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 MUTP22033 750 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 CMA1P23946 247 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 ARRB2P32121 409 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 ARL2P36404 184 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 UBA7P41226 1012 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 STAT6P42226 847 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 TLE2Q04725 743 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 PPFIA1Q13136 1202 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 CUL4BQ13620 913 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 CAPSQ13938 189 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 DHX8Q14562 1220 aaKnown RBP3.17□□□□□ -1.9
CSDE1-208ENST00000524652 EMC2Q15006 297 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 ELF2Q15723 593 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 PTGISQ16647 500 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 SMTNL2Q2TAL5 461 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 ANXA2RQ3ZCQ2 193 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 XKR9Q5GH70 373 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 XKR3Q5GH77 459 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 LIPMQ5VYY2 423 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 KRT79Q5XKE5 535 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 HAUS3Q68CZ6 603 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 ISM2Q6H9L7 571 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 NFRKBQ6P4R8 1299 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 ZNF474Q6S9Z5 364 aaPredicted RBP3.17□□□□□ -1.9
CSDE1-208ENST00000524652 CRTC1Q6UUV9 634 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 LRIG3Q6UXM1 1119 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 KRBA2Q6ZNG9 492 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 C1orf186Q6ZWK4 172 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 ANKRD33Q7Z3H0 272 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 SERINC5Q86VE9 423 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 RHPN2Q8IUC4 686 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 FBXL14Q8N1E6 418 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 SYT2Q8N9I0 419 aaPredicted RBP3.17□□□□□ -1.9
CSDE1-208ENST00000524652 FAM47BQ8NA70 645 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 NEK9Q8TD19 979 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 KCNG4Q8TDN1 519 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 DNAJB3Q8WWF6 145 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 ASB5Q8WWX0 329 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 MRPS27Q92552 414 aaKnown RBP3.17□□□□□ -1.9
CSDE1-208ENST00000524652 RAD54LQ92698 747 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 ATP6V0A1Q93050 837 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 TMEM143Q96AN5 459 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 MIB2Q96AX9 1013 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 DHX58Q96C10 678 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 DNAJC19Q96DA6 116 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 CEP170P1Q96L14 293 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 AK8Q96MA6 479 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 GLT1D1Q96MS3 346 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 REEP2Q9BRK0 252 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 NUDT22Q9BRQ3 303 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 NTPCRQ9BSD7 190 aaKnown RBP3.17□□□□□ -1.9
CSDE1-208ENST00000524652 KATNAL1Q9BW62 490 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 MAGEB5Q9BZ81 275 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 BLZF1Q9H2G9 400 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 AZI2Q9H6S1 392 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 MINDY3Q9H8M7 445 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 TUBE1Q9UJT0 475 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 TBX21Q9UL17 535 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 BPTFQ12830 3046 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 NRCAMQ92823 1304 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 KDM3AQ9Y4C1 1321 aa3.17□□□□□ -1.9
CSDE1-208ENST00000524652 MYH10P35580 1976 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 PLXNA3P51805 1871 aa3.16□□□□□ -1.9
CSDE1-208ENST00000524652 DOCK6Q96HP0 2047 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms