RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 HLA-DPA1P20036 260 aa11.91□□□□□ -0.5
CLN8-207ENST00000524258 HNRNPKP61978 463 aaKnown RBP eCLIP11.91□□□□□ -0.5
CLN8-207ENST00000524258 CDK3Q00526 305 aa11.91□□□□□ -0.5
CLN8-207ENST00000524258 CCDC173Q0VFZ6 552 aa11.91□□□□□ -0.5
CLN8-207ENST00000524258 PTK2BQ14289 1009 aa11.91□□□□□ -0.5
CLN8-207ENST00000524258 TRIP6Q15654 476 aaKnown RBP11.91□□□□□ -0.5
CLN8-207ENST00000524258 P3H1Q32P28 736 aa11.91□□□□□ -0.5
CLN8-207ENST00000524258 PROX2Q3B8N5 592 aa11.91□□□□□ -0.5
CLN8-207ENST00000524258 HEATR4Q86WZ0 1026 aa11.91□□□□□ -0.5
CLN8-207ENST00000524258 PHACTR4Q8IZ21 702 aa11.91□□□□□ -0.5
CLN8-207ENST00000524258 SLC25A41Q8N5S1 370 aa11.91□□□□□ -0.5
CLN8-207ENST00000524258 ZNF548Q8NEK5 533 aaPredicted RBP11.91□□□□□ -0.5
CLN8-207ENST00000524258 RHBDD1Q8TEB9 315 aa11.91□□□□□ -0.5
CLN8-207ENST00000524258 TSACCQ96A04 125 aaPredicted RBP11.91□□□□□ -0.5
CLN8-207ENST00000524258 AP2M1Q96CW1 435 aa11.91□□□□□ -0.5
CLN8-207ENST00000524258 MS4A14Q96JA4 679 aa11.91□□□□□ -0.5
CLN8-207ENST00000524258 PBKQ96KB5 322 aa11.91□□□□□ -0.5
CLN8-207ENST00000524258 WDR92Q96MX6 357 aa11.91□□□□□ -0.5
CLN8-207ENST00000524258 LRRC61Q9BV99 259 aa11.91□□□□□ -0.5
CLN8-207ENST00000524258 FICDQ9BVA6 458 aa11.91□□□□□ -0.5
CLN8-207ENST00000524258 SMARCAL1Q9NZC9 954 aa11.91□□□□□ -0.5
CLN8-207ENST00000524258 IL17CQ9P0M4 197 aa11.91□□□□□ -0.5
CLN8-207ENST00000524258 SLC17A4Q9Y2C5 497 aa11.91□□□□□ -0.5
CLN8-207ENST00000524258 ZKSCAN5Q9Y2L8 839 aa11.91□□□□□ -0.5
CLN8-207ENST00000524258 ST14Q9Y5Y6 855 aa11.91□□□□□ -0.5
CLN8-207ENST00000524258 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.91□□□□□ -0.5
CLN8-207ENST00000524258 CSNK1G3Q9Y6M4 447 aa11.91□□□□□ -0.5
CLN8-207ENST00000524258 BPTFQ12830 3046 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 USP12O75317 370 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 FGF1P05230 155 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 MYCLP1P12525 358 aaPredicted RBP11.9□□□□□ -0.5
CLN8-207ENST00000524258 CA5AP35218 305 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 HMGCLP35914 325 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 KCNJ1P48048 391 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 HK3P52790 923 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 THOP1P52888 689 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 DCDC1P59894 354 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 SRP54P61011 504 aaKnown RBP11.9□□□□□ -0.5
CLN8-207ENST00000524258 SNX1Q13596 522 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 SPARCL1Q14515 664 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 CYP1B1Q16678 543 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 FAXCQ5TGI0 409 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 TTC27Q6P3X3 843 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 ENPP7Q6UWV6 458 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 EID2Q8N6I1 236 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 OR56A4Q8NGH8 313 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 OR4C6Q8NH72 309 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 SETD7Q8WTS6 366 aaKnown RBP11.9□□□□□ -0.5
CLN8-207ENST00000524258 PDXPQ96GD0 296 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 OSBPL9Q96SU4 736 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 APOL2Q9BQE5 337 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 FAM83DQ9H4H8 585 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 TRABDQ9H4I3 376 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 SLC32A1Q9H598 525 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 WDR26Q9H7D7 661 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 MRPL40Q9NQ50 206 aaKnown RBP11.9□□□□□ -0.5
CLN8-207ENST00000524258 SNX12Q9UMY4 172 aa11.9□□□□□ -0.5
CLN8-207ENST00000524258 AAR2Q9Y312 384 aaKnown RBP11.9□□□□□ -0.5
CLN8-207ENST00000524258 PCYT1BQ9Y5K3 369 aaPredicted RBP11.9□□□□□ -0.5
CLN8-207ENST00000524258 OAS3Q9Y6K5 1087 aaKnown RBP11.9□□□□□ -0.5
CLN8-207ENST00000524258 COL5A1P20908 1838 aaPredicted RBP11.9□□□□□ -0.5
CLN8-207ENST00000524258 TDRD6O60522 2096 aaKnown RBP11.9□□□□□ -0.51
CLN8-207ENST00000524258 LMO7DNF2Z398 122 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 CES2O00748 559 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 AQP9O43315 295 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 SIGLEC6O43699 453 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 STK10O94804 968 aaKnown RBP11.89□□□□□ -0.51
CLN8-207ENST00000524258 AP2A1O95782 977 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 ADRB1P08588 477 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 ZSCAN5DPP0CG00 497 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 PSMA3P25788 255 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 PMLP29590 882 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 RPL22P35268 128 aaKnown RBP11.89□□□□□ -0.51
CLN8-207ENST00000524258 POLD2P49005 469 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 SIM1P81133 766 aaPredicted RBP11.89□□□□□ -0.51
CLN8-207ENST00000524258 PPARDQ03181 441 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 C1orf61Q13536 156 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 PTPRCAPQ14761 206 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 KCTD19Q17RG1 926 aaPredicted RBP11.89□□□□□ -0.51
CLN8-207ENST00000524258 LONRF2Q1L5Z9 754 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 PAPD7Q5XG87 772 aaKnown RBP11.89□□□□□ -0.51
CLN8-207ENST00000524258 RAET1GQ6H3X3 334 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 NRROSQ86YC3 692 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 FAM181AQ8N9Y4 354 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 DTX3LQ8TDB6 740 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 ACTRT1Q8TDG2 376 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 SRPK1Q96SB4 655 aaKnown RBP11.89□□□□□ -0.51
CLN8-207ENST00000524258 CDC6Q99741 560 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 FERMT1Q9BQL6 677 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 ETNK1Q9HBU6 452 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 IL26Q9NPH9 171 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 PKD2L2Q9NZM6 624 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 APOBEC3BQ9UH17 382 aaKnown RBP11.89□□□□□ -0.51
CLN8-207ENST00000524258 ZNF148Q9UQR1 794 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 NEU2Q9Y3R4 380 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 KCTD3Q9Y597 815 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 LRP4O75096 1905 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 CHD8Q9HCK8 2581 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 AKAP13Q12802 2813 aa11.89□□□□□ -0.51
CLN8-207ENST00000524258 PRSS38A1L453 326 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms