RNA–Protein interactions for RNA: ENST00000523054.5

CDKL3-209, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 2 BASIC

Gene CDKL3, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-209ENST00000523054 WDR43Q15061 677 aaKnown RBP eCLIP4.5□□□□□ -1.69
CDKL3-209ENST00000523054 FIGNQ5HY92 759 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 UBXN11Q5T124 520 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 CLEC9AQ6UXN8 241 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 RFX8Q6ZV50 586 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 FAM47EQ6ZV65 393 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 VSIG1Q86XK7 387 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 GATAD2AQ86YP4 633 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 SPARTQ8N0X7 666 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 Q8N1Y9 231 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 ALLCQ8N6M5 410 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 ANKRD53Q8N9V6 530 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 GOT1L1Q8NHS2 421 aaPredicted RBP4.5□□□□□ -1.69
CDKL3-209ENST00000523054 GPT2Q8TD30 523 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 HDAC2Q92769 488 aaKnown RBP4.5□□□□□ -1.69
CDKL3-209ENST00000523054 GRAMD1AQ96CP6 724 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 FOXRED1Q96CU9 486 aaPredicted RBP4.5□□□□□ -1.69
CDKL3-209ENST00000523054 MISP3Q96FF7 219 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 ARL5BQ96KC2 179 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 HRASLS5Q96KN8 279 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 GPATCH1Q9BRR8 931 aaKnown RBP4.5□□□□□ -1.69
CDKL3-209ENST00000523054 PANK2Q9BZ23 570 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 B3GNT4Q9C0J1 378 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 WNT5BQ9H1J7 359 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 AZI2Q9H6S1 392 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 CRLF2Q9HC73 371 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 UBN1Q9NPG3 1134 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 OBP2BQ9NPH6 170 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 KCNH7Q9NS40 1196 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 ZNF446Q9NWS9 450 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 MOCS1Q9NZB8 636 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 LRFN1Q9P244 771 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 ARPP21Q9UBL0 812 aaPredicted RBP4.5□□□□□ -1.69
CDKL3-209ENST00000523054 PTBP2Q9UKA9 531 aaKnown RBP4.5□□□□□ -1.69
CDKL3-209ENST00000523054 VAV3Q9UKW4 847 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 ATP6V1DQ9Y5K8 247 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 VPS13CQ709C8 3753 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 DIDO1Q9BTC0 2240 aaKnown RBP4.5□□□□□ -1.69
CDKL3-209ENST00000523054 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.5□□□□□ -1.69
CDKL3-209ENST00000523054 TRAV6A0A075B6T7 132 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 A0A1B0GTQ1 180 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 GSTTP1A0A1W2PQM5 241 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 CCDC169A6NNP5 214 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 TCP11X1B4DZS4 312 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 K7EQS6 105 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 ATP8B1O43520 1251 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 SULT1B1O43704 296 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 RANBP6O60518 1105 aaKnown RBP4.5□□□□□ -1.69
CDKL3-209ENST00000523054 MAFKO60675 156 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 DKC1O60832 514 aaKnown RBP eCLIP4.5□□□□□ -1.69
CDKL3-209ENST00000523054 PALMO75781 387 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 USP1O94782 785 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 FTLP02792 175 aaPredicted RBP4.5□□□□□ -1.69
CDKL3-209ENST00000523054 VTNP04004 478 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 HEXAP06865 529 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 THP07101 528 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 ZFYP08048 801 aaPredicted RBP4.5□□□□□ -1.69
CDKL3-209ENST00000523054 KITP10721 976 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 CD8BP10966 210 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 LIPCP11150 499 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 MTHFD2P13995 350 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 GABRG2P18507 467 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 SFPQP23246 707 aaKnown RBP eCLIP4.5□□□□□ -1.69
CDKL3-209ENST00000523054 ANXA13P27216 316 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 SOX6P35712 828 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 VPS41P49754 854 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 PMS2P54278 862 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 KRTAP10-9P60411 292 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 RPL11P62913 178 aaKnown RBP4.5□□□□□ -1.69
CDKL3-209ENST00000523054 TUBA4AP68366 448 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 TRAP1Q12931 704 aaKnown RBP4.5□□□□□ -1.69
CDKL3-209ENST00000523054 MALLQ13021 153 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 SGCGQ13326 291 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 DAG1Q14118 895 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 TGIF1Q15583 401 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 ZRSR1Q15695 479 aaKnown RBP4.5□□□□□ -1.69
CDKL3-209ENST00000523054 ZACNQ401N2 412 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 C5orf22Q49AR2 442 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 CEP78Q5JTW2 689 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 FAM26FQ5R3K3 315 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 AADACL4Q5VUY2 407 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 FAM173BQ6P4H8 233 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 ZPBP2Q6X784 338 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 CEP128Q6ZU80 1094 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 ENOSF1Q7L5Y1 443 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 KDELC2Q7Z4H8 507 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 LUZP1Q86V48 1076 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 CPOQ8IVL8 374 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 ITPRIPQ8IWB1 547 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 WDR63Q8IWG1 891 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 CCDC170Q8IYT3 715 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 MFSD4AQ8N468 514 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 PCYOX1LQ8NBM8 494 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 TMEM52Q8NDY8 209 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 C7orf57Q8NEG2 295 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 CTCFLQ8NI51 663 aaPredicted RBP4.5□□□□□ -1.69
CDKL3-209ENST00000523054 FAM167AQ96KS9 214 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 ZSCAN31Q96LW9 406 aaPredicted RBP4.5□□□□□ -1.69
CDKL3-209ENST00000523054 CCT7Q99832 543 aa4.5□□□□□ -1.69
CDKL3-209ENST00000523054 CCDC106Q9BWC9 280 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms