RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 RTP4Q96DX8 246 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 TEX101Q9BY14 249 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 MAGEE1Q9HCI5 957 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 FGF22Q9HCT0 170 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 TOR4AQ9NXH8 423 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 SHOC2Q9UQ13 582 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 ZNF711Q9Y462 761 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 NCOR2Q9Y618 2525 aa17.08■□□□□ 0.32
SNX17-209ENST00000494893 TRIM38O00635 465 aa17.07■□□□□ 0.32
SNX17-209ENST00000494893 GCATO75600 419 aa17.07■□□□□ 0.32
SNX17-209ENST00000494893 CELA2BP08218 269 aaPredicted RBP17.07■□□□□ 0.32
SNX17-209ENST00000494893 TSHRP16473 764 aa17.07■□□□□ 0.32
SNX17-209ENST00000494893 JUNDP17535 347 aa17.07■□□□□ 0.32
SNX17-209ENST00000494893 TEAD1P28347 426 aa17.07■□□□□ 0.32
SNX17-209ENST00000494893 GEMP55040 296 aa17.07■□□□□ 0.32
SNX17-209ENST00000494893 PTK2BQ14289 1009 aa17.07■□□□□ 0.32
SNX17-209ENST00000494893 SLC1A5Q15758 541 aa17.07■□□□□ 0.32
SNX17-209ENST00000494893 TMC3Q7Z5M5 1100 aa17.07■□□□□ 0.32
SNX17-209ENST00000494893 HEATR4Q86WZ0 1026 aa17.07■□□□□ 0.32
SNX17-209ENST00000494893 PHACTR4Q8IZ21 702 aa17.07■□□□□ 0.32
SNX17-209ENST00000494893 TTC30BQ8N4P2 665 aa17.07■□□□□ 0.32
SNX17-209ENST00000494893 ZNF548Q8NEK5 533 aaPredicted RBP17.07■□□□□ 0.32
SNX17-209ENST00000494893 PTCD2Q8WV60 388 aaKnown RBP17.07■□□□□ 0.32
SNX17-209ENST00000494893 PDXPQ96GD0 296 aa17.07■□□□□ 0.32
SNX17-209ENST00000494893 WDR92Q96MX6 357 aa17.07■□□□□ 0.32
SNX17-209ENST00000494893 FICDQ9BVA6 458 aa17.07■□□□□ 0.32
SNX17-209ENST00000494893 RIOK2Q9BVS4 552 aaKnown RBP17.07■□□□□ 0.32
SNX17-209ENST00000494893 WDR26Q9H7D7 661 aa17.07■□□□□ 0.32
SNX17-209ENST00000494893 KCTD5Q9NXV2 234 aa17.07■□□□□ 0.32
SNX17-209ENST00000494893 STK10O94804 968 aaKnown RBP17.06■□□□□ 0.32
SNX17-209ENST00000494893 FUCA1P04066 466 aa17.06■□□□□ 0.32
SNX17-209ENST00000494893 HNRNPKP61978 463 aaKnown RBP eCLIP17.06■□□□□ 0.32
SNX17-209ENST00000494893 SIM1P81133 766 aaPredicted RBP17.06■□□□□ 0.32
SNX17-209ENST00000494893 MSLNQ13421 630 aaPredicted RBP17.06■□□□□ 0.32
SNX17-209ENST00000494893 SNX1Q13596 522 aa17.06■□□□□ 0.32
SNX17-209ENST00000494893 HENMT1Q5T8I9 393 aaKnown RBP17.06■□□□□ 0.32
SNX17-209ENST00000494893 FAXCQ5TGI0 409 aa17.06■□□□□ 0.32
SNX17-209ENST00000494893 KCTD11Q693B1 232 aa17.06■□□□□ 0.32
SNX17-209ENST00000494893 DENND5AQ6IQ26 1287 aa17.06■□□□□ 0.32
SNX17-209ENST00000494893 ENPP7Q6UWV6 458 aa17.06■□□□□ 0.32
SNX17-209ENST00000494893 RANBP10Q6VN20 620 aa17.06■□□□□ 0.32
SNX17-209ENST00000494893 PRUNE1Q86TP1 453 aa17.06■□□□□ 0.32
SNX17-209ENST00000494893 SLCO6A1Q86UG4 719 aa17.06■□□□□ 0.32
SNX17-209ENST00000494893 NLRP8Q86W28 1048 aa17.06■□□□□ 0.32
SNX17-209ENST00000494893 RAVER1Q8IY67 606 aaKnown RBP17.06■□□□□ 0.32
SNX17-209ENST00000494893 NRSN1Q8IZ57 195 aa17.06■□□□□ 0.32
SNX17-209ENST00000494893 GLIS1Q8NBF1 620 aa17.06■□□□□ 0.32
SNX17-209ENST00000494893 GPR26Q8NDV2 337 aa17.06■□□□□ 0.32
SNX17-209ENST00000494893 AP2M1Q96CW1 435 aa17.06■□□□□ 0.32
SNX17-209ENST00000494893 APOL2Q9BQE5 337 aa17.06■□□□□ 0.32
SNX17-209ENST00000494893 FERMT1Q9BQL6 677 aa17.06■□□□□ 0.32
SNX17-209ENST00000494893 LRRC61Q9BV99 259 aa17.06■□□□□ 0.32
SNX17-209ENST00000494893 AP1M1Q9BXS5 423 aa17.06■□□□□ 0.32
SNX17-209ENST00000494893 FRMD8Q9BZ67 464 aaPredicted RBP17.06■□□□□ 0.32
SNX17-209ENST00000494893 FRMD8P1Q9BZ68 369 aaPredicted RBP17.06■□□□□ 0.32
SNX17-209ENST00000494893 CLPBQ9H078 707 aa17.06■□□□□ 0.32
SNX17-209ENST00000494893 ZFYVE1Q9HBF4 777 aa17.06■□□□□ 0.32
SNX17-209ENST00000494893 MRPL40Q9NQ50 206 aaKnown RBP17.06■□□□□ 0.32
SNX17-209ENST00000494893 CNOT6Q9ULM6 557 aaKnown RBP17.06■□□□□ 0.32
SNX17-209ENST00000494893 COL5A1P20908 1838 aaPredicted RBP17.05■□□□□ 0.32
SNX17-209ENST00000494893 GOLGA6L10A0A0M3HER8 536 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 FADS2P1A8MWK0 482 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 CCDC188H7C350 402 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 SCAMP1O15126 338 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 FFAR2O15552 330 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 ANXA9O76027 345 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 ADRB1P08588 477 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 MYCLP1P12525 358 aaPredicted RBP17.05■□□□□ 0.32
SNX17-209ENST00000494893 ETS1P14921 441 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 HLA-DPA1P20036 260 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 HK3P52790 923 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 SRP54P61011 504 aaKnown RBP17.05■□□□□ 0.32
SNX17-209ENST00000494893 CDK3Q00526 305 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 C1orf61Q13536 156 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 SPARCL1Q14515 664 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 RAET1GQ6H3X3 334 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 ADAMTSL4Q6UY14 1074 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 HID1Q8IV36 788 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 PRELID2Q8N945 189 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 LRRN4CLQ8ND94 238 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 OR56A4Q8NGH8 313 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 OR4C6Q8NH72 309 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 APOBEC3BQ9UH17 382 aaKnown RBP17.05■□□□□ 0.32
SNX17-209ENST00000494893 WASF3Q9UPY6 502 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 LRP4O75096 1905 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 PCNX2A6NKB5 2137 aa17.05■□□□□ 0.32
SNX17-209ENST00000494893 SPEGQ15772 3267 aa17.04■□□□□ 0.32
SNX17-209ENST00000494893 LY6G6EA0A0G2JKS1 128 aa17.04■□□□□ 0.32
SNX17-209ENST00000494893 GOLGA6CA6NDK9 693 aa17.04■□□□□ 0.32
SNX17-209ENST00000494893 GOLGA6BA6NDN3 693 aa17.04■□□□□ 0.32
SNX17-209ENST00000494893 CACNB4O00305 520 aaPredicted RBP17.04■□□□□ 0.32
SNX17-209ENST00000494893 AQP9O43315 295 aa17.04■□□□□ 0.32
SNX17-209ENST00000494893 SIGLEC6O43699 453 aa17.04■□□□□ 0.32
SNX17-209ENST00000494893 USP12O75317 370 aa17.04■□□□□ 0.32
SNX17-209ENST00000494893 ZNF189O75820 626 aaPredicted RBP17.04■□□□□ 0.32
SNX17-209ENST00000494893 DKK1O94907 266 aa17.04■□□□□ 0.32
SNX17-209ENST00000494893 TOP3BO95985 862 aaKnown RBP17.04■□□□□ 0.32
SNX17-209ENST00000494893 SLC4A1P02730 911 aa17.04■□□□□ 0.32
SNX17-209ENST00000494893 FGF1P05230 155 aa17.04■□□□□ 0.32
SNX17-209ENST00000494893 CEACAM5P06731 702 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms