RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 PALMO75781 387 aa14.17□□□□□ -0.14
PRPF40A-211ENST00000493468 HEXIM1O94992 359 aaKnown RBP14.17□□□□□ -0.14
PRPF40A-211ENST00000493468 PDGFAP04085 211 aa14.17□□□□□ -0.14
PRPF40A-211ENST00000493468 CYP1A1P04798 512 aaPredicted RBP14.17□□□□□ -0.14
PRPF40A-211ENST00000493468 FURINP09958 794 aa14.17□□□□□ -0.14
PRPF40A-211ENST00000493468 PRKCSHP14314 528 aaPredicted RBP14.17□□□□□ -0.14
PRPF40A-211ENST00000493468 NFKBIAP25963 317 aa14.17□□□□□ -0.14
PRPF40A-211ENST00000493468 VIPR1P32241 457 aa14.17□□□□□ -0.14
PRPF40A-211ENST00000493468 DCTP40126 519 aa14.17□□□□□ -0.14
PRPF40A-211ENST00000493468 DPTQ07507 201 aa14.17□□□□□ -0.14
PRPF40A-211ENST00000493468 RFTN1Q14699 578 aaPredicted RBP14.17□□□□□ -0.14
PRPF40A-211ENST00000493468 SNAP47Q5SQN1 464 aa14.17□□□□□ -0.14
PRPF40A-211ENST00000493468 ZNF761Q86XN6 746 aaPredicted RBP14.17□□□□□ -0.14
PRPF40A-211ENST00000493468 FAM114A1Q8IWE2 563 aa14.17□□□□□ -0.14
PRPF40A-211ENST00000493468 PAF1Q8N7H5 531 aa14.17□□□□□ -0.14
PRPF40A-211ENST00000493468 CINPQ9BW66 212 aaPredicted RBP14.17□□□□□ -0.14
PRPF40A-211ENST00000493468 NAA15Q9BXJ9 866 aaKnown RBP14.17□□□□□ -0.14
PRPF40A-211ENST00000493468 ULBP3Q9BZM4 244 aa14.17□□□□□ -0.14
PRPF40A-211ENST00000493468 CROTQ9UKG9 612 aa14.17□□□□□ -0.14
PRPF40A-211ENST00000493468 FHOD1Q9Y613 1164 aa14.17□□□□□ -0.14
PRPF40A-211ENST00000493468 MN1Q10571 1320 aaPredicted RBP14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 C2CD3Q4AC94 2353 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 A1L4Q6 167 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 GOLGA6L3A6NEY3 463 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 ARHGAP42A6NI28 874 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 A8MX80 341 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 INPP4BO15327 924 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 HTRA2O43464 458 aaPredicted RBP14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 CREB3O43889 395 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 SOCS5O75159 536 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 SORBS2O94875 1100 aaKnown RBP14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 GPD1P21695 349 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 ETV3P41162 512 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 POLD2P49005 469 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 HHEXQ03014 270 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 ERV3-1Q14264 604 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 MAN2A1Q16706 1144 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 PYCR3Q53H96 274 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 ZNF787Q6DD87 383 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 RAET1GQ6H3X3 334 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 C6orf15Q6UXA7 325 aaPredicted RBP14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 LYSMD3Q7Z3D4 306 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 PHLDB2Q86SQ0 1253 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 CREBRFQ8IUR6 639 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 SH3KBP1Q96B97 665 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 STN1Q9H668 368 aaKnown RBP14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 NOCTQ9UK39 431 aaKnown RBP14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 FZD10Q9ULW2 581 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 PLEKHM1Q9Y4G2 1056 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 OAS3Q9Y6K5 1087 aaKnown RBP14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 CSMD1Q96PZ7 3565 aa14.16□□□□□ -0.14
PRPF40A-211ENST00000493468 FBN2P35556 2912 aa14.15□□□□□ -0.14
PRPF40A-211ENST00000493468 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.15□□□□□ -0.14
PRPF40A-211ENST00000493468 WIPF3A6NGB9 483 aa14.15□□□□□ -0.14
PRPF40A-211ENST00000493468 F8VZ95 297 aa14.15□□□□□ -0.14
PRPF40A-211ENST00000493468 MAP3K6O95382 1288 aa14.15□□□□□ -0.14
PRPF40A-211ENST00000493468 KRT3P12035 628 aa14.15□□□□□ -0.14
PRPF40A-211ENST00000493468 RFC1P35251 1148 aaPredicted RBP14.15□□□□□ -0.14
PRPF40A-211ENST00000493468 MTIF2P46199 727 aaKnown RBP14.15□□□□□ -0.14
PRPF40A-211ENST00000493468 PPM1FP49593 454 aaPredicted RBP14.15□□□□□ -0.14
PRPF40A-211ENST00000493468 SEMA5AQ13591 1074 aa14.15□□□□□ -0.14
PRPF40A-211ENST00000493468 KLHDC7AQ5VTJ3 777 aa14.15□□□□□ -0.14
PRPF40A-211ENST00000493468 ADAMTSL4Q6UY14 1074 aa14.15□□□□□ -0.14
PRPF40A-211ENST00000493468 LZTR1Q8N653 840 aa14.15□□□□□ -0.14
PRPF40A-211ENST00000493468 SEC14L1Q92503 715 aa14.15□□□□□ -0.14
PRPF40A-211ENST00000493468 NCSTNQ92542 709 aa14.15□□□□□ -0.14
PRPF40A-211ENST00000493468 PSKH2Q96QS6 385 aa14.15□□□□□ -0.14
PRPF40A-211ENST00000493468 C11orf70Q9BRQ4 267 aa14.15□□□□□ -0.14
PRPF40A-211ENST00000493468 PCDHGA9Q9Y5G4 932 aaKnown RBP14.15□□□□□ -0.14
PRPF40A-211ENST00000493468 CDC14CA4D256 554 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 CREG1O75629 220 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 SOD1P00441 154 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 CYP2A6P11509 494 aaPredicted RBP14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 UCHL3P15374 230 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 LHCGRP22888 699 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 TNFRSF8P28908 595 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 PAPOLAP51003 745 aaKnown RBP14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 SCNN1BP51168 640 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 RENBPP51606 427 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 RIPPLY3P57055 190 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 TPI1P60174 286 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 CDR2Q01850 454 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 PTP4A2Q12974 167 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 IL11RAQ14626 422 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 PAPD7Q5XG87 772 aaKnown RBP14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 WDR59Q6PJI9 974 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 DOK6Q6PKX4 331 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 TRIM72Q6ZMU5 477 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 HSD11B1LQ7Z5J1 315 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 GALNT13Q8IUC8 556 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 PLXDC1Q8IUK5 500 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 AVL9Q8NBF6 648 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 C3orf20Q8ND61 904 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 STAMBPL1Q96FJ0 436 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 NSMCE3Q96MG7 304 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 SLC39A8Q9C0K1 460 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 TWSG1Q9GZX9 223 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 NDST4Q9H3R1 872 aa14.14□□□□□ -0.15
PRPF40A-211ENST00000493468 MLXIPLQ9NP71 852 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms