RNA–Protein interactions for RNA: ENST00000492779.5

RBM39-237, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-237ENST00000492779 LILRA6Q6PI73 481 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 ELMSAN1Q6PJG2 1045 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 TMEM207Q6UWW9 146 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 CHST15Q7LFX5 561 aaPredicted RBP6.6□□□□□ -1.35
RBM39-237ENST00000492779 RETREG3Q86VR2 466 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 ZC3HC1Q86WB0 502 aaKnown RBP6.6□□□□□ -1.35
RBM39-237ENST00000492779 CHERPQ8IWX8 916 aaKnown RBP6.6□□□□□ -1.35
RBM39-237ENST00000492779 PPP4R1Q8TF05 950 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 ANKRD49Q8WVL7 239 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 GAB3Q8WWW8 586 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 HSPBAP1Q96EW2 488 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 SLC22A12Q96S37 553 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 NPY6RQ99463 290 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 CIB1Q99828 191 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 ULBP1Q9BZM6 244 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 NAA50Q9GZZ1 169 aaKnown RBP6.6□□□□□ -1.35
RBM39-237ENST00000492779 SMG9Q9H0W8 520 aaKnown RBP6.6□□□□□ -1.35
RBM39-237ENST00000492779 WDR41Q9HAD4 459 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 XPR1Q9UBH6 696 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 DSEQ9UL01 958 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 VANGL2Q9ULK5 521 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 NEU3Q9UQ49 428 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 TDRKHQ9Y2W6 561 aaKnown RBP6.6□□□□□ -1.35
RBM39-237ENST00000492779 TMED5Q9Y3A6 229 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 CUL9Q8IWT3 2517 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 F5P12259 2224 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 H3BQ06 376 aaPredicted RBP6.6□□□□□ -1.35
RBM39-237ENST00000492779 SOCS2O14508 198 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 TNFRSF10BO14763 440 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 TRIM13O60858 407 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 ZNF189O75820 626 aaPredicted RBP6.6□□□□□ -1.35
RBM39-237ENST00000492779 TMCC1O94876 653 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 VAPBO95292 243 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 C8AP07357 584 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 THRAP10827 490 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 CDH2P19022 906 aaPredicted RBP6.6□□□□□ -1.35
RBM39-237ENST00000492779 MATKP42679 507 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 NME5P56597 212 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 TAS2R39P59534 338 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 SMAD3P84022 425 aaKnown RBP6.6□□□□□ -1.35
RBM39-237ENST00000492779 HYAL1Q12794 435 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 RAB33AQ14088 237 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 PTPRCAPQ14761 206 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 ACAP2Q15057 778 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 PYCR3Q53H96 274 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 PRPF38BQ5VTL8 546 aaKnown RBP6.6□□□□□ -1.35
RBM39-237ENST00000492779 CLEC6AQ6EIG7 209 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 KCNMB4Q86W47 210 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 EPHX4Q8IUS5 362 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 FUNDC1Q8IVP5 155 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 ST13P4Q8IZP2 240 aaPredicted RBP6.6□□□□□ -1.35
RBM39-237ENST00000492779 KREMEN2Q8NCW0 462 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 ACMSDQ8TDX5 336 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 SGCDQ92629 289 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 ERLEC1Q96DZ1 483 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 CMTM5Q96DZ9 223 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 TCEAL4Q96EI5 215 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 OLFM1Q99784 485 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 FERMT1Q9BQL6 677 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 CCDC28BQ9BUN5 200 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 TASP1Q9H6P5 420 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 ZNF334Q9HCZ1 680 aaPredicted RBP6.6□□□□□ -1.35
RBM39-237ENST00000492779 CASS4Q9NQ75 786 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 PRDM6Q9NQX0 595 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 C20orf96Q9NUD7 363 aaPredicted RBP6.6□□□□□ -1.35
RBM39-237ENST00000492779 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.6□□□□□ -1.355e-13■□□□□ 8.1
RBM39-237ENST00000492779 ARHGAP26Q9UNA1 814 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 RUVBL2Q9Y230 463 aaKnown RBP6.6□□□□□ -1.35
RBM39-237ENST00000492779 PCDHB5Q9Y5E4 795 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 BACE2Q9Y5Z0 518 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 COMMD3-BMI1R4GMX3 469 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 PLXNA3P51805 1871 aa6.6□□□□□ -1.35
RBM39-237ENST00000492779 ARHGAP10A1A4S6 786 aa6.59□□□□□ -1.35
RBM39-237ENST00000492779 RGSL1A5PLK6 1076 aa6.59□□□□□ -1.35
RBM39-237ENST00000492779 XPO1O14980 1071 aaKnown RBP6.59□□□□□ -1.35
RBM39-237ENST00000492779 CLPTM1O96005 669 aa6.59□□□□□ -1.35
RBM39-237ENST00000492779 JCHAINP01591 159 aa6.59□□□□□ -1.35
RBM39-237ENST00000492779 MLNP12872 115 aa6.59□□□□□ -1.35
RBM39-237ENST00000492779 GRK2P25098 689 aa6.59□□□□□ -1.35
RBM39-237ENST00000492779 ARCN1P48444 511 aaKnown RBP6.59□□□□□ -1.35
RBM39-237ENST00000492779 OXCT1P55809 520 aa6.59□□□□□ -1.35
RBM39-237ENST00000492779 HPCAP84074 193 aa6.59□□□□□ -1.35
RBM39-237ENST00000492779 BST2Q10589 180 aaKnown RBP6.59□□□□□ -1.35
RBM39-237ENST00000492779 TAF10Q12962 218 aa6.59□□□□□ -1.35
RBM39-237ENST00000492779 PLD1Q13393 1074 aa6.59□□□□□ -1.35
RBM39-237ENST00000492779 POU6F1Q14863 301 aa6.59□□□□□ -1.35
RBM39-237ENST00000492779 TBCCQ15814 346 aa6.59□□□□□ -1.35
RBM39-237ENST00000492779 CNGA3Q16281 694 aa6.59□□□□□ -1.35
RBM39-237ENST00000492779 AAK1Q2M2I8 961 aa6.59□□□□□ -1.35
RBM39-237ENST00000492779 SLC25A52Q3SY17 297 aa6.59□□□□□ -1.35
RBM39-237ENST00000492779 NXNQ6DKJ4 435 aa6.59□□□□□ -1.35
RBM39-237ENST00000492779 SLC15A3Q8IY34 581 aa6.59□□□□□ -1.35
RBM39-237ENST00000492779 PELI3Q8N2H9 469 aa6.59□□□□□ -1.35
RBM39-237ENST00000492779 CCNYL1Q8N7R7 359 aa6.59□□□□□ -1.35
RBM39-237ENST00000492779 KYQ8NBH2 561 aa6.59□□□□□ -1.35
RBM39-237ENST00000492779 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.59□□□□□ -1.35
RBM39-237ENST00000492779 ICA1LQ8NDH6 482 aa6.59□□□□□ -1.35
RBM39-237ENST00000492779 HEXDCQ8WVB3 486 aa6.59□□□□□ -1.35
RBM39-237ENST00000492779 DGCR14Q96DF8 476 aaKnown RBP6.59□□□□□ -1.35
RBM39-237ENST00000492779 SMARCD1Q96GM5 515 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms