RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 TARDBPQ13148 414 aaKnown RBP eCLIP4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 MAMLD1Q13495 774 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 GALNT3Q14435 633 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 SNX17Q15036 470 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 NEDD8Q15843 81 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 ATP6AP1Q15904 470 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 CTF1Q16619 201 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZNF181Q2M3W8 571 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 ASPRV1Q53RT3 343 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 LIN9Q5TKA1 542 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 WDR78Q5VTH9 848 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 AGAP6Q5VW22 663 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 BROXQ5VW32 411 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 SLC9A4Q6AI14 798 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 RINT1Q6NUQ1 792 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZCCHC8Q6NZY4 707 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 BBS12Q6ZW61 710 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 C1orf186Q6ZWK4 172 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 CYS1Q717R9 158 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZNF765Q7L2R6 523 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 PRSS48Q7RTY5 328 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 POLNQ7Z5Q5 900 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 LINC00523Q86TU6 105 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 VSIG10LQ86VR7 867 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 PHF13Q86YI8 300 aaPredicted RBP4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 ABI1Q8IZP0 508 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 SCML4Q8N228 414 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZCCHC7Q8N3Z6 543 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 SFRP1Q8N474 314 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 PPM1NQ8N819 430 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 TDRD5Q8NAT2 981 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 OR6F1Q8NGZ6 308 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 SLC7A14Q8TBB6 771 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZFP90Q8TF47 636 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 BTN2A2Q8WVV5 523 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 SLC39A13Q96H72 371 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 SLC45A3Q96JT2 553 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 UBXN10Q96LJ8 280 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 AGAP4Q96P64 663 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 ASB2Q96Q27 587 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 VPS35Q96QK1 796 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 PSKH2Q96QS6 385 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 MMP19Q99542 508 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 MCMBPQ9BTE3 642 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 AARSD1Q9BTE6 412 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 C9orf16Q9BUW7 83 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 TRPV6Q9H1D0 765 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 IKZF4Q9H2S9 585 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 CPVLQ9H3G5 476 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 COG4Q9H9E3 785 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 EFCAB1Q9HAE3 211 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZBTB26Q9HCK0 441 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 TCF7L2Q9NQB0 619 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 AASDHPPTQ9NRN7 309 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 MRGBPQ9NV56 204 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 IFT80Q9P2H3 777 aaPredicted RBP4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 IP6K2Q9UHH9 426 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZNF221Q9UK13 617 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 PACSIN3Q9UKS6 424 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 NUP50Q9UKX7 468 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 MRPS23Q9Y3D9 190 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 NAALAD2Q9Y3Q0 740 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 SPEF1Q9Y4P9 236 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 SNX13Q9Y5W8 968 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 COL4A1P02462 1669 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 MYH9P35579 1960 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 TRAV20A0A0B4J274 112 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 TCAF2A6NFQ2 919 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 SAC3D1A6NKF1 404 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 C3orf70A6NLC5 250 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 CXorf49A8MYA2 514 aaPredicted RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 H0YAE9 185 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 H7C0C1 242 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 PHGDHO43175 533 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 PRODHO43272 600 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 PPM1BO75688 479 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 TSPAN9O75954 239 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 ALDH1A2O94788 518 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 IFNB1P01574 187 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 KRT8P05787 483 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 GSNP06396 782 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 GSTM1P09488 218 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 TRAPPC2P0DI81 140 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 TRAPPC2BP0DI82 140 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 GLULP15104 373 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 CKMT2P17540 419 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 KCNA6P17658 529 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 DDX5P17844 614 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 IL12AP29459 219 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 POLR2IP36954 125 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 DDOSTP39656 456 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 CTSKP43235 329 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 MAGEA3P43357 314 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 NSFP46459 744 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 SERPINB10P48595 397 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 PLA2G16P53816 162 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 GABARAPL2P60520 117 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 SRP54P61011 504 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 PSMC5P62195 406 aa4.75□□□□□ -1.65
CDC42BPA-213ENST00000488131 SNRPFP62306 86 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms