RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 NXPE2Q96DL1 559 aa10.23□□□□□ -0.77
RNF220-215ENST00000487332 HES6Q96HZ4 224 aa10.23□□□□□ -0.77
RNF220-215ENST00000487332 WDR24Q96S15 920 aa10.23□□□□□ -0.77
RNF220-215ENST00000487332 C19orf43Q9BQ61 176 aa10.23□□□□□ -0.77
RNF220-215ENST00000487332 LGR4Q9BXB1 951 aa10.23□□□□□ -0.77
RNF220-215ENST00000487332 CEP41Q9BYV8 373 aa10.23□□□□□ -0.77
RNF220-215ENST00000487332 GBA3Q9H227 469 aa10.23□□□□□ -0.77
RNF220-215ENST00000487332 ZFYVE1Q9HBF4 777 aa10.23□□□□□ -0.77
RNF220-215ENST00000487332 SEPT10Q9P0V9 454 aa10.23□□□□□ -0.77
RNF220-215ENST00000487332 KLHL8Q9P2G9 620 aaPredicted RBP10.23□□□□□ -0.77
RNF220-215ENST00000487332 SAE1Q9UBE0 346 aaPredicted RBP10.23□□□□□ -0.77
RNF220-215ENST00000487332 DOLKQ9UPQ8 538 aa10.23□□□□□ -0.77
RNF220-215ENST00000487332 CLCA2Q9UQC9 943 aa10.23□□□□□ -0.77
RNF220-215ENST00000487332 ZNF711Q9Y462 761 aa10.23□□□□□ -0.77
RNF220-215ENST00000487332 ADGRG1Q9Y653 693 aa10.23□□□□□ -0.77
RNF220-215ENST00000487332 MACROD2A1Z1Q3 448 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 GOLGA6L9A6NEM1 432 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 DDX3YO15523 660 aaKnown RBP10.22□□□□□ -0.77
RNF220-215ENST00000487332 OPA1O60313 960 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 CLDN7O95471 211 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 MT-CYBP00156 380 aaPredicted RBP10.22□□□□□ -0.77
RNF220-215ENST00000487332 CEACAM5P06731 702 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 NFKB1P19838 968 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 OTUD4Q01804 1114 aaKnown RBP10.22□□□□□ -0.77
RNF220-215ENST00000487332 KLF1Q13351 362 aaPredicted RBP10.22□□□□□ -0.77
RNF220-215ENST00000487332 GALNT3Q14435 633 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 RTP5Q14D33 572 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 CCDC70Q6NSX1 233 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 GUSBP11Q6P575 273 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 TMC3Q7Z5M5 1100 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 ZC3H18Q86VM9 953 aaKnown RBP10.22□□□□□ -0.77
RNF220-215ENST00000487332 C17orf82Q86X59 251 aaPredicted RBP10.22□□□□□ -0.77
RNF220-215ENST00000487332 PROSER1Q86XN7 944 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 KYQ8NBH2 561 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 ACTL9Q8TC94 416 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 ZCCHC14Q8WYQ9 949 aaKnown RBP10.22□□□□□ -0.77
RNF220-215ENST00000487332 HIC2Q96JB3 615 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 PLEKHG4BQ96PX9 1271 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 DEPDC7Q96QD5 511 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 HERPUD2Q9BSE4 406 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 DESI2Q9BSY9 194 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 ZSCAN5AQ9BUG6 496 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 GSDMCQ9BYG8 508 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 FRMD8P1Q9BZ68 369 aaPredicted RBP10.22□□□□□ -0.77
RNF220-215ENST00000487332 RMI1Q9H9A7 625 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.22□□□□□ -0.77
RNF220-215ENST00000487332 HACD3Q9P035 362 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 CAPN6Q9Y6Q1 641 aa10.22□□□□□ -0.77
RNF220-215ENST00000487332 COL27A1Q8IZC6 1860 aaPredicted RBP10.21□□□□□ -0.77
RNF220-215ENST00000487332 PTPRBP23467 1997 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 SHROOM3Q8TF72 1996 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 PPFIA2O75334 1257 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 ANXA9O76027 345 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 STK10O94804 968 aaKnown RBP10.21□□□□□ -0.77
RNF220-215ENST00000487332 MT-CO3P00414 261 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 FGF1P05230 155 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 CELA2BP08218 269 aaPredicted RBP10.21□□□□□ -0.77
RNF220-215ENST00000487332 RBP3P10745 1247 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 PYGMP11217 842 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 JUPP14923 745 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 RBL1P28749 1068 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 HMGCLP35914 325 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 TNNT3P45378 269 aaPredicted RBP10.21□□□□□ -0.77
RNF220-215ENST00000487332 GEMP55040 296 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 WNT3AP56704 352 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 ILF3Q12906 894 aaKnown RBP eCLIP10.21□□□□□ -0.77
RNF220-215ENST00000487332 C1orf61Q13536 156 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 HLTFQ14527 1009 aaKnown RBP eCLIP10.21□□□□□ -0.77
RNF220-215ENST00000487332 NR1D2Q14995 579 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 PTPRRQ15256 657 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 CLPPQ16740 277 aaPredicted RBP10.21□□□□□ -0.77
RNF220-215ENST00000487332 CCDC181Q5TID7 509 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 DENND2CQ68D51 928 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 KCTD16Q68DU8 428 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 IGF2-ASQ6U949 168 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 PID1Q7Z2X4 250 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 EFL1Q7Z2Z2 1120 aaKnown RBP10.21□□□□□ -0.77
RNF220-215ENST00000487332 LYSMD3Q7Z3D4 306 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 TRAM1L1Q8N609 369 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 SPATA22Q8NHS9 363 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 EID2BQ96D98 161 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 OXNAD1Q96HP4 312 aaPredicted RBP10.21□□□□□ -0.77
RNF220-215ENST00000487332 MRGPRX2Q96LB1 330 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 SPATA13Q96N96 652 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 VPS35Q96QK1 796 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 OR2M4Q96R27 311 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 RIOK2Q9BVS4 552 aaKnown RBP10.21□□□□□ -0.77
RNF220-215ENST00000487332 HEMGNQ9BXL5 484 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 FAM83DQ9H4H8 585 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 CCDC86Q9H6F5 360 aaKnown RBP10.21□□□□□ -0.77
RNF220-215ENST00000487332 CAAP1Q9H8G2 361 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 CARS2Q9HA77 564 aaKnown RBP10.21□□□□□ -0.77
RNF220-215ENST00000487332 CYP4F12Q9HCS2 524 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 MRPL40Q9NQ50 206 aaKnown RBP10.21□□□□□ -0.77
RNF220-215ENST00000487332 TRIM10Q9UDY6 481 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 RSPH14Q9UHP6 348 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 FEZ2Q9UHY8 353 aaPredicted RBP10.21□□□□□ -0.77
RNF220-215ENST00000487332 CD84Q9UIB8 345 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 APPL1Q9UKG1 709 aa10.21□□□□□ -0.77
RNF220-215ENST00000487332 PADI4Q9UM07 663 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms