RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 MDFICQ9P1T7 246 aa5.59□□□□□ -1.51
CCDC39-202ENST00000471307 PHRF1Q9P1Y6 1649 aaKnown RBP5.59□□□□□ -1.52
CCDC39-202ENST00000471307 BLMP54132 1417 aaPredicted RBP5.58□□□□□ -1.52
CCDC39-202ENST00000471307 LTN1O94822 1766 aa5.58□□□□□ -1.52
CCDC39-202ENST00000471307 ATXN2Q99700 1313 aaKnown RBP5.58□□□□□ -1.52
CCDC39-202ENST00000471307 TULP2O00295 520 aa5.58□□□□□ -1.52
CCDC39-202ENST00000471307 TIPRLO75663 272 aa5.58□□□□□ -1.52
CCDC39-202ENST00000471307 UBE3AQ05086 875 aa5.58□□□□□ -1.52
CCDC39-202ENST00000471307 TNFAIP1Q13829 316 aa5.58□□□□□ -1.52
CCDC39-202ENST00000471307 OASLQ15646 514 aaKnown RBP5.58□□□□□ -1.52
CCDC39-202ENST00000471307 AMZ1Q400G9 498 aa5.58□□□□□ -1.52
CCDC39-202ENST00000471307 SERTAD4-AS1Q5TG53 156 aa5.58□□□□□ -1.52
CCDC39-202ENST00000471307 ATG16L1Q676U5 607 aa5.58□□□□□ -1.52
CCDC39-202ENST00000471307 TUBA1AQ71U36 451 aa5.58□□□□□ -1.52
CCDC39-202ENST00000471307 POC1AQ8NBT0 407 aa5.58□□□□□ -1.52
CCDC39-202ENST00000471307 ZSCAN31Q96LW9 406 aaPredicted RBP5.58□□□□□ -1.52
CCDC39-202ENST00000471307 EYA3Q99504 573 aa5.58□□□□□ -1.52
CCDC39-202ENST00000471307 TUBA1CQ9BQE3 449 aa5.58□□□□□ -1.52
CCDC39-202ENST00000471307 PHF7Q9BWX1 381 aaPredicted RBP5.58□□□□□ -1.52
CCDC39-202ENST00000471307 EVA1AQ9H8M9 152 aa5.58□□□□□ -1.52
CCDC39-202ENST00000471307 TCF7L2Q9NQB0 619 aa5.58□□□□□ -1.52
CCDC39-202ENST00000471307 BABAM1Q9NWV8 329 aa5.58□□□□□ -1.52
CCDC39-202ENST00000471307 ZNF224Q9NZL3 707 aa5.58□□□□□ -1.52
CCDC39-202ENST00000471307 IL1RAPL1Q9NZN1 696 aa5.58□□□□□ -1.52
CCDC39-202ENST00000471307 COL16A1Q07092 1604 aaPredicted RBP5.58□□□□□ -1.52
CCDC39-202ENST00000471307 COL22A1Q8NFW1 1626 aaPredicted RBP5.58□□□□□ -1.52
CCDC39-202ENST00000471307 ABCC6O95255 1503 aa5.58□□□□□ -1.52
CCDC39-202ENST00000471307 PEAK1Q9H792 1746 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 CRYBG1Q9Y4K1 1723 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 KIAA0232Q92628 1395 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 JCADQ9P266 1359 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 SHPRHQ149N8 1683 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 IGSF1Q8N6C5 1336 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 IGHV4OR15-8A0A075B7B6 117 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 ZIC3O60481 467 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 IGLV2-11P01706 119 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 HNRNPH1P31943 449 aaKnown RBP5.57□□□□□ -1.52
CCDC39-202ENST00000471307 PSMC2P35998 433 aaKnown RBP5.57□□□□□ -1.52
CCDC39-202ENST00000471307 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.57□□□□□ -1.52
CCDC39-202ENST00000471307 ACSM2AQ08AH3 577 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 ITGADQ13349 1161 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 NEDD9Q14511 834 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 ATP13A5Q4VNC0 1218 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 NAA35Q5VZE5 725 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 LDHAL6AQ6ZMR3 332 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 TMTC1Q8IUR5 882 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 ANKRD18AQ8IVF6 992 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 SCCPDHQ8NBX0 429 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 C11orf65Q8NCR3 313 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 SORCS1Q8WY21 1168 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 HERVK_113Q902F9 699 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 PLEKHF1Q96S99 279 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 DONSONQ9NYP3 566 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 KIAA1456Q9P272 454 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 PEMTQ9UBM1 199 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 CDC14AQ9UNH5 594 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 SNX9Q9Y5X1 595 aa5.57□□□□□ -1.52
CCDC39-202ENST00000471307 ZBED9Q6R2W3 1325 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 MAPK8IP3Q9UPT6 1336 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 PRSS47A8MTI9 375 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 TEX22C9J3V5 150 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 PRAC2D3DTV9 90 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 GRID2O43424 1007 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 KLK8O60259 260 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 AFPP02771 609 aaKnown RBP5.56□□□□□ -1.52
CCDC39-202ENST00000471307 UMODP07911 640 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 HMOX1P09601 288 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 SRCP12931 536 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 AMD1P17707 334 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 PRKAR2BP31323 418 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 STX2P32856 288 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 HSPA1LP34931 641 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 PIGAP37287 484 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 CLDN2P57739 230 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 CHRNDQ07001 517 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 TAF11Q15544 211 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 LRRC8DQ7L1W4 858 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 TADA2BQ86TJ2 420 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 KIAA2013Q8IYS2 634 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 MAGEC3Q8TD91 643 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 SECTM1Q8WVN6 248 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 FEM1CQ96JP0 617 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 MXRA8Q9BRK3 442 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 BEX4Q9NWD9 120 aaPredicted RBP5.56□□□□□ -1.52
CCDC39-202ENST00000471307 HCN3Q9P1Z3 774 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 SIX4Q9UIU6 781 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 COL18A1P39060 1754 aa5.56□□□□□ -1.52
CCDC39-202ENST00000471307 KDRP35968 1356 aa5.55□□□□□ -1.52
CCDC39-202ENST00000471307 RGPD5Q99666 1765 aa5.55□□□□□ -1.52
CCDC39-202ENST00000471307 GAGE10A6NGK3 116 aa5.55□□□□□ -1.52
CCDC39-202ENST00000471307 IFRD1O00458 451 aaPredicted RBP5.55□□□□□ -1.52
CCDC39-202ENST00000471307 RFPL2O75678 378 aa5.55□□□□□ -1.52
CCDC39-202ENST00000471307 KDM4BO94953 1096 aa5.55□□□□□ -1.52
CCDC39-202ENST00000471307 CLDN14O95500 239 aa5.55□□□□□ -1.52
CCDC39-202ENST00000471307 CENPBP07199 599 aaPredicted RBP5.55□□□□□ -1.52
CCDC39-202ENST00000471307 LINC00271P0C7V0 271 aa5.55□□□□□ -1.52
CCDC39-202ENST00000471307 DGKAP23743 735 aa5.55□□□□□ -1.52
CCDC39-202ENST00000471307 TMPOP42166 694 aaKnown RBP5.55□□□□□ -1.52
CCDC39-202ENST00000471307 HALP42357 657 aa5.55□□□□□ -1.52
CCDC39-202ENST00000471307 RAD23BP54727 409 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms