RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 PCYOX1Q9UHG3 505 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 RSPH14Q9UHP6 348 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 KLF15Q9UIH9 416 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 RIMKLBQ9ULI2 386 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 ZNF148Q9UQR1 794 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 R3HDM2Q9Y2K5 976 aaKnown RBP3.53□□□□□ -1.84
TRIM59-202ENST00000468542 NEU2Q9Y3R4 380 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 PCDHB11Q9Y5F2 797 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 PCDHGC4Q9Y5F7 938 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 RAI2Q9Y5P3 530 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 HS3ST3A1Q9Y663 406 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 R4GN57 208 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 COL27A1Q8IZC6 1860 aaPredicted RBP3.53□□□□□ -1.84
TRIM59-202ENST00000468542 PIKFYVEQ9Y2I7 2098 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 MYLKQ15746 1914 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 ADAMTS9Q9P2N4 1935 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 ARHGEF17Q96PE2 2063 aaPredicted RBP3.52□□□□□ -1.85
TRIM59-202ENST00000468542 AKAP13Q12802 2813 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 SPTY2D1-AS1A0A0U1RR47 76 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 A0A1W2PQU0 124 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 A0A1W2PR77 199 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 KLHL33A6NCF5 533 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 NPIPB15A6NHN6 443 aaPredicted RBP3.52□□□□□ -1.85
TRIM59-202ENST00000468542 A6NNZ2 444 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 C1QTNF9BB2RNN3 333 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 H7C0S8 307 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 FPGTO14772 594 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 TNFRSF10CO14798 259 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 WNT9AO14904 365 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 KHNYNO15037 678 aaKnown RBP3.52□□□□□ -1.85
TRIM59-202ENST00000468542 FANCGO15287 622 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 PCDHGA12O60330 932 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 PHF2O75151 1096 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 RECQL5O94762 991 aaPredicted RBP3.52□□□□□ -1.85
TRIM59-202ENST00000468542 PCDH8O95206 1070 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 MAP3K6O95382 1288 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 ECEL1O95672 775 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 CER1O95813 267 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 IFNB1P01574 187 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 SYPP08247 313 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 PDHA1P08559 390 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 FURINP09958 794 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 ATXN1LP0C7T5 689 aaKnown RBP3.52□□□□□ -1.85
TRIM59-202ENST00000468542 EPXP11678 715 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 MLNP12872 115 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 C6P13671 934 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 TSHRP16473 764 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 TPSB2P20231 275 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 TGM1P22735 817 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 LHCGRP22888 699 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 KELP23276 732 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 ITPKAP23677 461 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 PSMB4P28070 264 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 CD38P28907 300 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 CASQ1P31415 396 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 GKP32189 559 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 VIPR1P32241 457 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 CXCR5P32302 372 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 COILP38432 576 aaPredicted RBP3.52□□□□□ -1.85
TRIM59-202ENST00000468542 RABIFP47224 123 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 RXRGP48443 463 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 DHPSP49366 369 aaPredicted RBP3.52□□□□□ -1.85
TRIM59-202ENST00000468542 ARRB1P49407 418 aaPredicted RBP3.52□□□□□ -1.85
TRIM59-202ENST00000468542 LIG3P49916 1009 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 STC1P52823 247 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 EPHB1P54762 984 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 GDF10P55107 478 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 WNT3AP56704 352 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 MAXP61244 160 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 PPP2CBP62714 309 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 PPP2CAP67775 309 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 FAM193AP78312 1265 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 ARHGAP8P85298 464 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 CKAP4Q07065 602 aaKnown RBP3.52□□□□□ -1.85
TRIM59-202ENST00000468542 ITKQ08881 620 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 SRSF5Q13243 272 aaKnown RBP3.52□□□□□ -1.85
TRIM59-202ENST00000468542 MSLNQ13421 630 aaPredicted RBP3.52□□□□□ -1.85
TRIM59-202ENST00000468542 MTM1Q13496 603 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 DHX34Q14147 1143 aaKnown RBP3.52□□□□□ -1.85
TRIM59-202ENST00000468542 ARHGEF7Q14155 803 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 PTK2BQ14289 1009 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 IHHQ14623 411 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 STAT4Q14765 748 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 LRRC14Q15048 493 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 TPSAB1Q15661 275 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 SLC1A5Q15758 541 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 CNGA3Q16281 694 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 CDKN3Q16667 212 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 C4orf17Q53FE4 359 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 LRRC66Q68CR7 880 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 AADACL2Q6P093 401 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 CCDC137Q6PK04 289 aaKnown RBP3.52□□□□□ -1.85
TRIM59-202ENST00000468542 DBX2Q6ZNG2 339 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 NLRP9Q7RTR0 991 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 TMC3Q7Z5M5 1100 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 TECPR1Q7Z6L1 1165 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 FAM124AQ86V42 546 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 HOOK3Q86VS8 718 aa3.52□□□□□ -1.85
TRIM59-202ENST00000468542 CACUL1Q86Y37 369 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms