RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SLC39A8Q9C0K1 460 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 CLPBQ9H078 707 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 MAGEH1Q9H213 219 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 PRORYQ9H606 182 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 C7orf69Q9H7B7 122 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 TPSG1Q9NRR2 321 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 TMEM248Q9NWD8 314 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 TAS2R14Q9NYV8 317 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 NLGN3Q9NZ94 848 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 GULP1Q9UBP9 304 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 FZD10Q9ULW2 581 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 SATB2Q9UPW6 733 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 NEU3Q9UQ49 428 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 SIK3Q9Y2K2 1263 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 LRP4O75096 1905 aa4.74□□□□□ -1.65
GTF3C3-208ENST00000455546 FREM2Q5SZK8 3169 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 BPTFQ12830 3046 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 SCN8AQ9UQD0 1980 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 AHCTF1Q8WYP5 2266 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 TCRBV5S1A1TA0A578 114 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 RASA4BC9J798 803 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 AREL1O15033 823 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 YY2O15391 372 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 RRP8O43159 456 aaKnown RBP4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 TEX33O43247 280 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 AQP9O43315 295 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 RASA4O43374 803 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 AP1G1O43747 822 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 SUSD5O60279 629 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 TM7SF2O76062 418 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 CBX7O95931 251 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 GSRP00390 522 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 TPM2P07951 284 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 ALPPL2P10696 532 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 ATP1A3P13637 1013 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 TSHRP16473 764 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 TNFAIP3P21580 790 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 ACTN2P35609 894 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 IGFALSP35858 605 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 NSFP46459 744 aaKnown RBP4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 RABIFP47224 123 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 RGRP47804 291 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 MAPKAPK2P49137 400 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 GSK3AP49840 483 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 THOP1P52888 689 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 PFN3P60673 137 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 RHOAP61586 193 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 CXADRP78310 365 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 GABREP78334 506 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 CA9Q16790 459 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 ISXQ2M1V0 245 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 TBC1D25Q3MII6 688 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 PLA2G4EQ3MJ16 856 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 C3orf38Q5JPI3 329 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 CT47A1Q5JQC4 288 aaPredicted RBP4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 ACBD5Q5T8D3 534 aaPredicted RBP4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 ARHGAP40Q5TG30 622 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 KCTD16Q68DU8 428 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 ACAD10Q6JQN1 1059 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 SASS6Q6UVJ0 657 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 ENPP7Q6UWV6 458 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 KYAT3Q6YP21 454 aaKnown RBP4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 TRIM72Q6ZMU5 477 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 ARHGAP36Q6ZRI8 547 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 MON1BQ7L1V2 547 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 IRF2BP2Q7Z5L9 587 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 PARGQ86W56 976 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 PHF13Q86YI8 300 aaPredicted RBP4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 DCP2Q8IU60 420 aaKnown RBP4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 CAMK1DQ8IU85 385 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 SFTPA2Q8IWL1 248 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 TP53INP2Q8IXH6 220 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 MCOLN2Q8IZK6 566 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 ARFGAP1Q8N6T3 406 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 RTL3Q8N8U3 475 aaKnown RBP4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 FAM181AQ8N9Y4 354 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 NEK11Q8NG66 645 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 CXorf40AQ8TE69 158 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 PPP1R14AQ96A00 147 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 ISG20Q96AZ6 181 aaKnown RBP4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 ATXN7L3BQ96GX2 97 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 NSMCE3Q96MG7 304 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 MCEEQ96PE7 176 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 LENG8Q96PV6 779 aaPredicted RBP4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 TRIM7Q9C029 511 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 TTYH3Q9C0H2 523 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 HSD3B7Q9H2F3 369 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 CPNE5Q9HCH3 593 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 GPR27Q9NS67 375 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 LHX3Q9UBR4 397 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 PCSK1NQ9UHG2 260 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 OR1A2Q9Y585 309 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 ZZEF1O43149 2961 aa4.73□□□□□ -1.65
GTF3C3-208ENST00000455546 COL6A6A6NMZ7 2263 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 A0A0U1RQS6 177 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 EME2A4GXA9 379 aaPredicted RBP4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 LRRC10BA6NIK2 292 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 KLK10O43240 276 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 PALMO75781 387 aa4.72□□□□□ -1.65
GTF3C3-208ENST00000455546 C1QL1O75973 258 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms