RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 NDUFS1P28331 727 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 HOXD10P28358 340 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 MPGP29372 298 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 ARL1P40616 181 aaPredicted RBP4.51□□□□□ -1.69
LINC00393-202ENST00000452852 IL15P40933 162 aaPredicted RBP4.51□□□□□ -1.69
LINC00393-202ENST00000452852 UBA7P41226 1012 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 EFNA5P52803 228 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 PPP5CP53041 499 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 CDH8P55286 799 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 WDR5P61964 334 aaKnown RBP4.51□□□□□ -1.69
LINC00393-202ENST00000452852 UBXN2AP68543 259 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 PPATQ06203 517 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 TCP10Q12799 353 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 PPIL2Q13356 520 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 PRPF4BQ13523 1007 aaKnown RBP4.51□□□□□ -1.69
LINC00393-202ENST00000452852 CNGA3Q16281 694 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 SRSF7Q16629 238 aaKnown RBP eCLIP4.51□□□□□ -1.69
LINC00393-202ENST00000452852 ARL13AQ5H913 290 aaPredicted RBP4.51□□□□□ -1.69
LINC00393-202ENST00000452852 RAB41Q5JT25 222 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 CEP78Q5JTW2 689 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 SLC30A9Q6PML9 568 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 MOB3CQ70IA8 216 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 GALNT7Q86SF2 657 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 TADA2BQ86TJ2 420 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 GALNT13Q8IUC8 556 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 ADGRF2Q8IZF7 708 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 GHDCQ8N2G8 530 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 GABPB2Q8TAK5 448 aaPredicted RBP4.51□□□□□ -1.69
LINC00393-202ENST00000452852 FAM151AQ8WW52 585 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 HSPH1Q92598 858 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 SMARCE1Q969G3 411 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 RITA1Q96K30 269 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 MMS19Q96T76 1030 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 SH2D3AQ9BRG2 576 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 ABHD14AQ9BUJ0 271 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 ADGRE3Q9BY15 652 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 SFXN1Q9H9B4 322 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 SNTG1Q9NSN8 517 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 C20orf141Q9NUB4 165 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.51□□□□□ -1.69
LINC00393-202ENST00000452852 CTNNAL1Q9UBT7 734 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 INTS6Q9UL03 887 aaKnown RBP4.51□□□□□ -1.69
LINC00393-202ENST00000452852 PKP3Q9Y446 797 aa4.51□□□□□ -1.69
LINC00393-202ENST00000452852 HEMK1Q9Y5R4 338 aaPredicted RBP4.51□□□□□ -1.69
LINC00393-202ENST00000452852 CDK5RAP2Q96SN8 1893 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 BTBD19C9JJ37 291 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 POC1B-GALNT4F8VUJ3 575 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 BCAT2O15382 392 aaPredicted RBP4.5□□□□□ -1.69
LINC00393-202ENST00000452852 IPO8O15397 1037 aaKnown RBP4.5□□□□□ -1.69
LINC00393-202ENST00000452852 TLR2O60603 784 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 USP12O75317 370 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 OR2C1O95371 312 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 TYK2P29597 1187 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 FMO4P31512 558 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 GJC1P36383 396 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 PRMT2P55345 433 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 GOLGA8DPQ0D2H9 430 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 MVPQ14764 893 aaKnown RBP4.5□□□□□ -1.69
LINC00393-202ENST00000452852 TAF11Q15544 211 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 PLEKHS1Q5SXH7 462 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 HECTD3Q5T447 861 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 GKAP1Q5VSY0 366 aaPredicted RBP4.5□□□□□ -1.69
LINC00393-202ENST00000452852 DENND2CQ68D51 928 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 APOBEC3HQ6NTF7 200 aaKnown RBP4.5□□□□□ -1.69
LINC00393-202ENST00000452852 CDC42EP5Q6NZY7 148 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 SERPINA13PQ6UXR4 307 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 DENND5BQ6ZUT9 1274 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 GALNTL5Q7Z4T8 443 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 BCDIN3DQ7Z5W3 292 aaKnown RBP4.5□□□□□ -1.69
LINC00393-202ENST00000452852 DNAJB7Q7Z6W7 309 aaPredicted RBP4.5□□□□□ -1.69
LINC00393-202ENST00000452852 LINC00346Q8IVM7 164 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 SFTPA1Q8IWL2 248 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 CPXM2Q8N436 756 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.5□□□□□ -1.69
LINC00393-202ENST00000452852 DNAAF1Q8NEP3 725 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 ZKSCAN4Q969J2 545 aaPredicted RBP4.5□□□□□ -1.69
LINC00393-202ENST00000452852 ADAD1Q96M93 576 aaKnown RBP4.5□□□□□ -1.69
LINC00393-202ENST00000452852 ABHD1Q96SE0 405 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 PARK7Q99497 189 aaKnown RBP4.5□□□□□ -1.69
LINC00393-202ENST00000452852 QTRT1Q9BXR0 403 aaKnown RBP4.5□□□□□ -1.69
LINC00393-202ENST00000452852 SEMA4CQ9C0C4 833 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 TMEM248Q9NWD8 314 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 ASNSD1Q9NWL6 643 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 ARL15Q9NXU5 204 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 SUCLA2Q9P2R7 463 aaPredicted RBP4.5□□□□□ -1.69
LINC00393-202ENST00000452852 NLKQ9UBE8 527 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 ZNF112Q9UJU3 913 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 FBXO4Q9UKT5 387 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 PCDHGB5Q9Y5G0 923 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 FAM169AQ9Y6X4 670 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 FOCADQ5VW36 1801 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 PHIPQ8WWQ0 1821 aa4.5□□□□□ -1.69
LINC00393-202ENST00000452852 SALL1Q9NSC2 1324 aa4.49□□□□□ -1.69
LINC00393-202ENST00000452852 MYH8P13535 1937 aa4.49□□□□□ -1.69
LINC00393-202ENST00000452852 A0A1B0GUL7 405 aa4.49□□□□□ -1.69
LINC00393-202ENST00000452852 C17orf113A0A1B0GUU1 675 aa4.49□□□□□ -1.69
LINC00393-202ENST00000452852 A0A1W2PQF6 199 aa4.49□□□□□ -1.69
LINC00393-202ENST00000452852 TCRBV7S3A2A0A539 114 aa4.49□□□□□ -1.69
LINC00393-202ENST00000452852 TCRBV5S1A1TA0A578 114 aa4.49□□□□□ -1.69
LINC00393-202ENST00000452852 FAM170AA1A519 330 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms