RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 PRSS21Q9Y6M0 314 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 CACNA1FO60840 1977 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 SYNJ2O15056 1496 aa3.08□□□□□ -1.92
HMGB1P31-201ENST00000437242 IGKV6D-41A0A0C4DH26 115 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 GOLGA6L9A6NEM1 432 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 NCAM2O15394 837 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 ANP32CO43423 234 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 KLK8O60259 260 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 WDR1O75083 606 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 TAF12Q16514 161 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 ALFQ53S48 1182 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 GPATCH4Q5T3I0 446 aaKnown RBP3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 SLC27A1Q6PCB7 646 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 TAOK1Q7L7X3 1001 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 FOXRED2Q8IWF2 684 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 KIAA2013Q8IYS2 634 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 TMEM57Q8N5G2 664 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 HCAR2Q8TDS4 363 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 TM9SF4Q92544 642 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 UBXN10Q96LJ8 280 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 SIN3AQ96ST3 1273 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 POLR3CQ9BUI4 534 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 UPF2Q9HAU5 1272 aaKnown RBP3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 PDP2Q9P2J9 529 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 FEM1BQ9UK73 627 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 CARD8Q9Y2G2 431 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 GDAQ9Y2T3 454 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 DERAQ9Y315 318 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 SOGA1O94964 1423 aa3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 MAGI1Q96QZ7 1491 aaPredicted RBP3.07□□□□□ -1.92
HMGB1P31-201ENST00000437242 B9A039 149 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 EIF3FO00303 357 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 PER2O15055 1255 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 KIF21BO75037 1637 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 G6PDP11413 515 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 MYOD1P15172 320 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 RXRAP19793 462 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 RRM1P23921 792 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 CHRNB4P30926 498 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 EIF2S3P41091 472 aaKnown RBP3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 LUMP51884 338 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 CLDN2P57739 230 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 IRX1P78414 480 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 TLE2Q04725 743 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 GRIN2AQ12879 1464 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 GRIN2BQ13224 1484 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 CUL4BQ13620 913 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 CTXN3Q4LDR2 81 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 ABCC10Q5T3U5 1492 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 LRRC8EQ6NSJ5 796 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 KCTD18Q6PI47 426 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 LRRTM4Q86VH4 590 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 SUGP1Q8IWZ8 645 aaKnown RBP3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 IL17REQ8NFR9 667 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 AFG1LQ8WV93 481 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 HERVK_113Q902F9 699 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 FBXL8Q96CD0 374 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 ST6GAL2Q96JF0 529 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 LRR1Q96L50 414 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 EGFL8Q99944 293 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 SYT17Q9BSW7 474 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 NUF2Q9BZD4 464 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 EPHX3Q9H6B9 360 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 NOD2Q9HC29 1040 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 SLC7A10Q9NS82 523 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 SAGE1Q9NXZ1 904 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 MAP3K20Q9NYL2 800 aaKnown RBP3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 ZNF624Q9P2J8 865 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 ZNF69Q9UC07 566 aa3.06□□□□□ -1.92
HMGB1P31-201ENST00000437242 TAF1P21675 1872 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 CUL7Q14999 1698 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 RUSC2Q8N2Y8 1516 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 NUP160Q12769 1436 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 PABPN1LA6NDY0 278 aaKnown RBP3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 SMIM1B2RUZ4 78 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 HHLA1C9JL84 531 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 TSPAN3O60637 253 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 CNPP09543 421 aaKnown RBP3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 ETFAP13804 333 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 MAPK9P45984 424 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 VAMP2P63027 116 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 EEF1A1P68104 462 aaKnown RBP3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 IRX6P78412 446 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 UBE3AQ05086 875 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 ANKRD1Q15327 319 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 KRT24Q2M2I5 525 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 MAP3K21Q5TCX8 1036 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 EEF1A1P5Q5VTE0 462 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 C17orf99Q6UX52 265 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 C15orf39Q6ZRI6 1047 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 MTSS1LQ765P7 747 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 ZNF34Q8IZ26 560 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 STPG4Q8N801 248 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 STAMBPL1Q96FJ0 436 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 TWNKQ96RR1 684 aa3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 ESRP2Q9H6T0 727 aaKnown RBP3.05□□□□□ -1.92
HMGB1P31-201ENST00000437242 DDX4Q9NQI0 724 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms