RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 OAFQ86UD1 273 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 TC2NQ8N9U0 490 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 OR52J3Q8NH60 311 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 RORBQ92753 470 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 SYT17Q9BSW7 474 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 ELAC1Q9H777 363 aaKnown RBP8.4□□□□□ -1.06
SCN9A-203ENST00000409672 WHRNQ9P202 907 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 MRTO4Q9UKD2 239 aaKnown RBP8.4□□□□□ -1.06
SCN9A-203ENST00000409672 PRDM15P57071 1507 aaPredicted RBP8.4□□□□□ -1.06
SCN9A-203ENST00000409672 TTC34A8MYJ7 566 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 RFXANKO14593 260 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 EIF3HO15372 352 aaKnown RBP eCLIP8.4□□□□□ -1.061e-6■■■□□ 19
SCN9A-203ENST00000409672 CCL5P13501 91 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 SLC7A1P30825 629 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 CSTF2P33240 577 aaKnown RBP eCLIP8.4□□□□□ -1.061e-6■□□□□ 8
SCN9A-203ENST00000409672 LBX1P52954 281 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 UGT2B15P54855 530 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 PEX6Q13608 980 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 NR1D2Q14995 579 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 SAMD4BQ5PRF9 694 aaKnown RBP8.4□□□□□ -1.06
SCN9A-203ENST00000409672 SLC43A3Q8NBI5 491 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 RBM18Q96H35 190 aaKnown RBP8.4□□□□□ -1.06
SCN9A-203ENST00000409672 C12orf66Q96MD2 445 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 OR52E6Q96RD3 313 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 KXD1Q9BQD3 176 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 ZNF518BQ9C0D4 1074 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 GANQ9H2C0 597 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 PCDHB3Q9Y5E6 796 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 A2ML1A8K2U0 1454 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 CARNS1A5YM72 827 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 RLN1P04808 185 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 CCL14Q16627 93 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 CERCAMQ5T4B2 595 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 AFTPHQ6ULP2 937 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 BEND4Q6ZU67 534 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 KYQ8NBH2 561 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 COQ8BQ96D53 544 aa8.4□□□□□ -1.06
SCN9A-203ENST00000409672 DYTNA2CJ06 578 aa8.4□□□□□ -1.07
SCN9A-203ENST00000409672 PCDHGA12O60330 932 aa8.4□□□□□ -1.07
SCN9A-203ENST00000409672 C8AP07357 584 aa8.4□□□□□ -1.07
SCN9A-203ENST00000409672 RPL10P27635 214 aaKnown RBP8.4□□□□□ -1.07
SCN9A-203ENST00000409672 IZUMO2Q6UXV1 221 aa8.4□□□□□ -1.07
SCN9A-203ENST00000409672 HFE2Q6ZVN8 426 aa8.4□□□□□ -1.07
SCN9A-203ENST00000409672 IL22RA1Q8N6P7 574 aa8.4□□□□□ -1.07
SCN9A-203ENST00000409672 KCTD4Q8WVF5 259 aa8.4□□□□□ -1.07
SCN9A-203ENST00000409672 CCDC177Q9NQR7 707 aaPredicted RBP8.4□□□□□ -1.07
SCN9A-203ENST00000409672 A6NL46 340 aa8.4□□□□□ -1.07
SCN9A-203ENST00000409672 CLDN4O14493 209 aa8.4□□□□□ -1.07
SCN9A-203ENST00000409672 CLEC3AO75596 197 aa8.4□□□□□ -1.07
SCN9A-203ENST00000409672 KELP23276 732 aa8.4□□□□□ -1.07
SCN9A-203ENST00000409672 GLRA2P23416 452 aa8.4□□□□□ -1.07
SCN9A-203ENST00000409672 CCND3P30281 292 aaPredicted RBP8.4□□□□□ -1.07
SCN9A-203ENST00000409672 PPP4CP60510 307 aa8.4□□□□□ -1.07
SCN9A-203ENST00000409672 KCTD21Q4G0X4 260 aa8.4□□□□□ -1.07
SCN9A-203ENST00000409672 NEPROQ6NW34 567 aa8.4□□□□□ -1.07
SCN9A-203ENST00000409672 OR6Y1Q8NGX8 325 aa8.4□□□□□ -1.07
SCN9A-203ENST00000409672 ADAMTS15Q8TE58 950 aa8.4□□□□□ -1.07
SCN9A-203ENST00000409672 RBCK1Q9BYM8 510 aa8.4□□□□□ -1.07
SCN9A-203ENST00000409672 ROPN1BQ9BZX4 212 aaPredicted RBP8.4□□□□□ -1.07
SCN9A-203ENST00000409672 ROPN1Q9HAT0 212 aaPredicted RBP8.4□□□□□ -1.07
SCN9A-203ENST00000409672 TRHDEQ9UKU6 1024 aa8.4□□□□□ -1.07
SCN9A-203ENST00000409672 MRPS33Q9Y291 106 aaKnown RBP8.4□□□□□ -1.07
SCN9A-203ENST00000409672 GIT1Q9Y2X7 761 aa8.4□□□□□ -1.07
SCN9A-203ENST00000409672 ZNF541Q9H0D2 1346 aa8.4□□□□□ -1.07
SCN9A-203ENST00000409672 A6NCN8 305 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 LPOP22079 712 aaPredicted RBP8.39□□□□□ -1.07
SCN9A-203ENST00000409672 TPP2P29144 1249 aaPredicted RBP8.39□□□□□ -1.07
SCN9A-203ENST00000409672 CCKBRP32239 447 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 GP5P40197 560 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 NOXRED1Q6NXP6 359 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 SLAIN1Q8ND83 568 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 UPF1Q92900 1129 aaKnown RBP eCLIP8.39□□□□□ -1.07
SCN9A-203ENST00000409672 TBX5Q99593 518 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 KCNF1Q9H3M0 494 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 ALG2Q9H553 416 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 ZDHHC4Q9NPG8 344 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 GSTK1Q9Y2Q3 226 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 J3QRK9 145 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 ATG13O75143 517 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 LSM8O95777 96 aaKnown RBP8.39□□□□□ -1.07
SCN9A-203ENST00000409672 LDLRP01130 860 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 CMPK1P30085 196 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 VHLP40337 213 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 UBXN11Q5T124 520 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 AGBL2Q5U5Z8 902 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 FOXR2Q6PJQ5 311 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 OTOP3Q7RTS5 596 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 OR4L1Q8NH43 312 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 CEP44Q9C0F1 390 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 SEC61A2Q9H9S3 476 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 FTSJ1Q9UET6 329 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 PLAGL1Q9UM63 463 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 OTOL1A6NHN0 477 aaPredicted RBP8.39□□□□□ -1.07
SCN9A-203ENST00000409672 WRBO00258 174 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 TNFRSF21O75509 655 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 FAM182AQ5T1J6 154 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 PTCHD4Q6ZW05 846 aa8.39□□□□□ -1.07
SCN9A-203ENST00000409672 RP9Q8TA86 221 aaKnown RBP8.39□□□□□ -1.07
SCN9A-203ENST00000409672 PTCD2Q8WV60 388 aaKnown RBP8.39□□□□□ -1.07
SCN9A-203ENST00000409672 C8orf48Q96LL4 319 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms