RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 TNFSF13BQ9Y275 285 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 MRPS7Q9Y2R9 242 aaKnown RBP17.64■□□□□ 0.41
SMPD4-202ENST00000409031 PREX1Q8TCU6 1659 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 HTR3EA5X5Y0 456 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 TSPAN3O60637 253 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 VTNP04004 478 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 CYBBP04839 570 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 CD97P48960 835 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 SEMA5AQ13591 1074 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 TFAP2DQ7Z6R9 452 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 VSIG10LQ86VR7 867 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 GLIS1Q8NBF1 620 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 NELL1Q92832 810 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 AGAP2Q99490 1192 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 MED28Q9H204 178 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 LSM7Q9UK45 103 aaKnown RBP17.64■□□□□ 0.41
SMPD4-202ENST00000409031 SLIT3O75094 1523 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 TCRBV7S3A2A0A539 114 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 CXorf49A8MYA2 514 aaPredicted RBP17.64■□□□□ 0.41
SMPD4-202ENST00000409031 BTBD19C9JJ37 291 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 EPB42P16452 691 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 SMIM11AP58511 58 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 CLEC6AQ6EIG7 209 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 RASSF6Q6ZTQ3 369 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 ADAMTSL2Q86TH1 951 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 SLC34A3Q8N130 599 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 TINF2Q9BSI4 451 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 MOSPD1Q9UJG1 213 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 CFL2Q9Y281 166 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 FUOMA2VDF0 154 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 H3BMM5 538 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 PPIBP23284 216 aaKnown RBP17.63■□□□□ 0.41
SMPD4-202ENST00000409031 TNFSF9P41273 254 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 AIF1P55008 147 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 EEFSECP57772 596 aaKnown RBP17.63■□□□□ 0.41
SMPD4-202ENST00000409031 SULT2A1Q06520 285 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 CCNIQ14094 377 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 ACAP2Q15057 778 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 KRT78Q8N1N4 520 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 NKX2-3Q8TAU0 364 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 DCSTAMPQ9H295 470 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 MYH8P13535 1937 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 NFICP08651 508 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 NCK1P16333 377 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 CYP2A7P20853 494 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 DGKAP23743 735 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 CRY1Q16526 586 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 GALNT12Q8IXK2 581 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 COLGALT2Q8IYK4 626 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 ZBTB26Q9HCK0 441 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 SNTG2Q9NY99 539 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 NDUFAF6Q330K2 333 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 DENND6AQ8IWF6 608 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 PTGFRNQ9P2B2 879 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 PHF11Q9UIL8 331 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 DYRK1BQ9Y463 629 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 CLTBP09497 229 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 PRKCHP24723 683 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 MBLAC2Q68D91 279 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 LCLAT1Q6UWP7 414 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 PIGZQ86VD9 579 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 ZC3H3Q8IXZ2 948 aaKnown RBP17.63■□□□□ 0.41
SMPD4-202ENST00000409031 TRPV1Q8NER1 839 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 SERPINB11Q96P15 392 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 PANX1Q96RD7 426 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 ACO2Q99798 780 aaKnown RBP17.63■□□□□ 0.41
SMPD4-202ENST00000409031 TRPC4Q9UBN4 977 aa17.63■□□□□ 0.41
SMPD4-202ENST00000409031 WTIPA6NIX2 430 aaPredicted RBP17.62■□□□□ 0.41
SMPD4-202ENST00000409031 PSIP1O75475 530 aaKnown RBP17.62■□□□□ 0.41
SMPD4-202ENST00000409031 ITGB6P18564 788 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 CRATP43155 626 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 PTSQ03393 145 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 DNASE1L3Q13609 305 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 MSS51Q4VC12 460 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 ERICH5Q6P6B1 374 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 OR5K1Q8NHB7 308 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 UTP4Q969X6 686 aaKnown RBP17.62■□□□□ 0.41
SMPD4-202ENST00000409031 NACC2Q96BF6 587 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 ACTR3BQ9P1U1 418 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 PRMT5O14744 637 aaPredicted RBP17.62■□□□□ 0.41
SMPD4-202ENST00000409031 ADAMTS3O15072 1205 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 HOXD12P35452 270 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 SLC15A1P46059 708 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 PTPRNQ16849 979 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 CCDC157Q569K6 752 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 HECTD2Q5U5R9 776 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 APOBEC3HQ6NTF7 200 aaKnown RBP17.62■□□□□ 0.41
SMPD4-202ENST00000409031 TTC29Q8NA56 475 aaPredicted RBP17.62■□□□□ 0.41
SMPD4-202ENST00000409031 CMASQ8NFW8 434 aaPredicted RBP17.62■□□□□ 0.41
SMPD4-202ENST00000409031 C1GALT1C1Q96EU7 318 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 SMARCD1Q96GM5 515 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 COPS4Q9BT78 406 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 SLC22A4Q9H015 551 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 ZDHHC7Q9NXF8 308 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 AHSPQ9NZD4 102 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 MKLN1Q9UL63 735 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 PCDHGA3Q9Y5H0 932 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 CLTCQ00610 1675 aaKnown RBP17.62■□□□□ 0.41
SMPD4-202ENST00000409031 TNS2Q63HR2 1409 aa17.62■□□□□ 0.41
SMPD4-202ENST00000409031 CASKO14936 926 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms