RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 FEM1CQ96JP0 617 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 PACSIN1Q9BY11 444 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 TCEAL2Q9H3H9 227 aaPredicted RBP9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 KLHL11Q9NVR0 708 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 DNAJC28Q9NX36 388 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 CAPN11Q9UMQ6 739 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 NENFQ9UMX5 172 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 R3HDM2Q9Y2K5 976 aaKnown RBP9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 SCINQ9Y6U3 715 aa9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 COL5A1P20908 1838 aaPredicted RBP9.73□□□□□ -0.85
NIF3L1-202ENST00000409020 NDUFAB1O14561 156 aa9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 DAPK3O43293 454 aa9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 TSPAN6O43657 245 aa9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 PIAS2O75928 621 aa9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 URI1O94763 535 aaPredicted RBP9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 SERPING1P05155 500 aa9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 AMPD1P23109 780 aa9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 S100A5P33763 92 aa9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 IGFALSP35858 605 aa9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 NDST2P52849 883 aa9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 SLC25A11Q02978 314 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 DMPKQ09013 629 aa9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 PDE1CQ14123 709 aaPredicted RBP9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 INAVAQ3KP66 663 aa9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 CCDC153Q494R4 210 aa9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 KCTD16Q68DU8 428 aa9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 PPP1R2P3Q6NXS1 205 aa9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 OXR1Q8N573 874 aa9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 SYN2Q92777 582 aaPredicted RBP9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 FUBP1Q96AE4 644 aaKnown RBP9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 CENPTQ96BT3 561 aa9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 NUP85Q9BW27 656 aa9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 OSBPL1AQ9BXW6 950 aa9.72□□□□□ -0.85
NIF3L1-202ENST00000409020 LY6G6EA0A0G2JKS1 128 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 A0A1B0GVG6 124 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 HTR3EA5X5Y0 456 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 PABPN1LA6NDY0 278 aaKnown RBP9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 YKT6O15498 198 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 MAGEC1O60732 1142 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 RFPL3O75679 317 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 PALMO75781 387 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 PEX11BO96011 259 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 MYBL1P10243 752 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 RARAP10276 462 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 ENDOUP21128 410 aaKnown RBP9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 S100A1P23297 94 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 CCNCP24863 283 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 HTR7P34969 479 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 PCK1P35558 622 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 CD97P48960 835 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 PFN3P60673 137 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 SKOR1P84550 965 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 SLC10A7Q0GE19 358 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 SGCGQ13326 291 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 TCEA2Q15560 299 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 BCL2A1Q16548 175 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 DPYSL2Q16555 572 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 ATP13A4Q4VNC1 1196 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 FAM182AQ5T1J6 154 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 AGAP9Q5VTM2 703 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 POLNQ7Z5Q5 900 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 BPHLQ86WA6 291 aaPredicted RBP9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 PROSER1Q86XN7 944 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 RBFAQ8N0V3 343 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 TP53I13Q8NBR0 393 aaPredicted RBP9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 ZNF548Q8NEK5 533 aaPredicted RBP9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 GDAP1Q8TB36 358 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 LRRN4Q8WUT4 740 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 CASKIN2Q8WXE0 1202 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 ZDHHC16Q969W1 377 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 RAB7BQ96AH8 199 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 CLIP3Q96DZ5 547 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 LENG8Q96PV6 779 aaPredicted RBP9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 CSPG4P5Q96PW8 444 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 SUV39H2Q9H5I1 410 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 MRPL47Q9HD33 250 aaKnown RBP9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 PCDH12Q9NPG4 1184 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 SEPT10Q9P0V9 454 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 ANAPC7Q9UJX3 599 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 HS3ST3A1Q9Y663 406 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 U3KQA8 63 aa9.71□□□□□ -0.85
NIF3L1-202ENST00000409020 SPTY2D1-AS1A0A0U1RR47 76 aa9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 TSPAN11A1L157 253 aa9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 TRABD2BA6NFA1 517 aa9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 ARHGAP42A6NI28 874 aa9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 FPGTO14772 594 aa9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 PFDN1O60925 122 aa9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 CYP1A2P05177 515 aa9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 CELA2BP08218 269 aaPredicted RBP9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 IL4RP24394 825 aa9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 RABIFP47224 123 aa9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 TUBA4AP68366 448 aa9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 MMRN1Q13201 1228 aa9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 PTPRRQ15256 657 aa9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 IRF4Q15306 451 aa9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 UGP2Q16851 508 aa9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 LACTB2Q53H82 288 aaPredicted RBP9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 HES3Q5TGS1 186 aa9.71□□□□□ -0.86
NIF3L1-202ENST00000409020 ZNF554Q86TJ5 538 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms