RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 AK5Q9Y6K8 562 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 USP32Q8NFA0 1604 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.52□□□□□ -0.57
VCL-202ENST00000372755 DHFRP00374 187 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 CBFBQ13951 182 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 C9orf64Q5T6V5 341 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 PGBD2Q6P3X8 592 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 FAM131AQ6UXB0 335 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 MEIOBQ8N635 442 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 SLC4A11Q8NBS3 891 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 TRNT1Q96Q11 434 aaKnown RBP11.52□□□□□ -0.57
VCL-202ENST00000372755 XKRYO14609 159 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 ALOX15BO15296 676 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 CLDN11O75508 207 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 RPP40O75818 363 aaKnown RBP11.52□□□□□ -0.57
VCL-202ENST00000372755 ASMTP46597 345 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 RPS6KA3P51812 740 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 RTP1P59025 263 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 TNS2Q63HR2 1409 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 RBM44Q6ZP01 1051 aaKnown RBP11.52□□□□□ -0.57
VCL-202ENST00000372755 AMIGO2Q86SJ2 522 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 CRELD1Q96HD1 420 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 AP4B1Q9Y6B7 739 aa11.52□□□□□ -0.57
VCL-202ENST00000372755 FRMPD1Q5SYB0 1578 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 PLK4O00444 970 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 BANF1O75531 89 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 ITGA3P26006 1051 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 ATP13A4Q4VNC1 1196 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 DUPD1Q68J44 220 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 C12orf56Q8IXR9 622 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 CPA6Q8N4T0 437 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 COPS5Q92905 334 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 RHOJQ9H4E5 214 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 DNAJC11Q9NVH1 559 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 ADGRE2Q9UHX3 823 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 HES2Q9Y543 173 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 A0A1W2PQ67 120 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 ATG13O75143 517 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 PIRTP0C851 137 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 AKT2P31751 481 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 ATP13A5Q4VNC0 1218 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 SLC34A3Q8N130 599 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 PRELID2Q8N945 189 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 ABCG4Q9H172 646 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 IMP3Q9NV31 184 aaKnown RBP11.51□□□□□ -0.57
VCL-202ENST00000372755 PCDHB9Q9Y5E1 797 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 NPEPPSL1A6NEC2 478 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 FSCN2O14926 492 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 PGM3O95394 542 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 TNFSF9P41273 254 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 CTSKP43235 329 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 VBP1P61758 197 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 MAP2K5Q13163 448 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 LAPTM5Q13571 262 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 LARS2Q15031 903 aaKnown RBP11.51□□□□□ -0.57
VCL-202ENST00000372755 CEP68Q76N32 757 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 SPATA6LQ8N4H0 392 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 LPPQ93052 612 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 EXOC2Q96KP1 924 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 RNF19AQ9NV58 838 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 SASH3O75995 380 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 CALCAP01258 141 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 COL6A2P12110 1019 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 SLC7A2P52569 658 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 PARP15Q460N3 678 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 CCNYL2Q5T2Q4 361 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 PACS2Q86VP3 889 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 SRFBP1Q8NEF9 429 aaKnown RBP11.51□□□□□ -0.57
VCL-202ENST00000372755 FCRL2Q96LA5 508 aaPredicted RBP11.51□□□□□ -0.57
VCL-202ENST00000372755 FRMD6Q96NE9 622 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 GPER1Q99527 375 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 GLOD4Q9HC38 313 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 KCND1Q9NSA2 647 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 DMTF1Q9Y222 760 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 A0A1W2PQ72 361 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 SCAMP3O14828 347 aaKnown RBP11.51□□□□□ -0.57
VCL-202ENST00000372755 CHP2O43745 196 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 GLUD1P00367 558 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 TARBP2Q15633 366 aaKnown RBP11.51□□□□□ -0.57
VCL-202ENST00000372755 SWI5Q1ZZU3 235 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 SLC25A52Q3SY17 297 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 SULT1C3Q6IMI6 304 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 ZNF730Q6ZMV8 503 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 DEFB132Q7Z7B7 95 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 TNS4Q8IZW8 715 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 PACSIN3Q9UKS6 424 aa11.51□□□□□ -0.57
VCL-202ENST00000372755 ZNF490Q9ULM2 529 aaPredicted RBP11.51□□□□□ -0.57
VCL-202ENST00000372755 TBC1D3DA0A087WVF3 549 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 TBC1D3IA0A087WXS9 549 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 TBC1D3EA0A087X179 549 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 TBC1D3KA0A087X1G2 549 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 GLYATL1P3A0A0U1RQE8 302 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 TBC1D3FA6NER0 549 aaPredicted RBP11.5□□□□□ -0.57
VCL-202ENST00000372755 TBC1D3LB9A6J9 549 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 MAP2K7O14733 419 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 APODP05090 189 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 TBC1D3HP0C7X1 549 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 CYP4B1P13584 511 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 SDC2P34741 201 aa11.5□□□□□ -0.57
VCL-202ENST00000372755 GNPDA1P46926 289 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms