RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 CUL3Q13618 768 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 PGM2L1Q6PCE3 622 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 TMC8Q8IU68 726 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 CEP70Q8NHQ1 597 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 RP9Q8TA86 221 aaKnown RBP20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 C2orf49Q9BVC5 232 aaPredicted RBP20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 ERVK-6Q9BXR3 956 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 LRRC3Q9BY71 257 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 STX18Q9P2W9 335 aaKnown RBP20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 FKBPLQ9UIM3 349 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 MCM8Q9UJA3 840 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 MED16Q9Y2X0 877 aa20.31■□□□□ 0.84
CHRNA3-202ENST00000348639 PFDN6O15212 129 aa20.3■□□□□ 0.84
CHRNA3-202ENST00000348639 CCNT2O60583 730 aaKnown RBP20.3■□□□□ 0.84
CHRNA3-202ENST00000348639 MT-CO1P00395 513 aa20.3■□□□□ 0.84
CHRNA3-202ENST00000348639 MC4RP32245 332 aa20.3■□□□□ 0.84
CHRNA3-202ENST00000348639 TTPAP49638 278 aa20.3■□□□□ 0.84
CHRNA3-202ENST00000348639 AP1S1P61966 158 aa20.3■□□□□ 0.84
CHRNA3-202ENST00000348639 SETMARQ53H47 684 aaPredicted RBP20.3■□□□□ 0.84
CHRNA3-202ENST00000348639 ATXN7L2Q5T6C5 722 aaPredicted RBP20.3■□□□□ 0.84
CHRNA3-202ENST00000348639 C1orf146Q5VVC0 180 aa20.3■□□□□ 0.84
CHRNA3-202ENST00000348639 TMEM198Q66K66 360 aa20.3■□□□□ 0.84
CHRNA3-202ENST00000348639 RPS27LQ71UM5 84 aaKnown RBP20.3■□□□□ 0.84
CHRNA3-202ENST00000348639 CPXM2Q8N436 756 aa20.3■□□□□ 0.84
CHRNA3-202ENST00000348639 RYBPQ8N488 228 aaPredicted RBP20.3■□□□□ 0.84
CHRNA3-202ENST00000348639 DDI1Q8WTU0 396 aa20.3■□□□□ 0.84
CHRNA3-202ENST00000348639 USP13Q92995 863 aaPredicted RBP20.3■□□□□ 0.84
CHRNA3-202ENST00000348639 CATSPER2Q96P56 530 aa20.3■□□□□ 0.84
CHRNA3-202ENST00000348639 DERL2Q9GZP9 239 aa20.3■□□□□ 0.84
CHRNA3-202ENST00000348639 TNFRSF12AQ9NP84 129 aa20.3■□□□□ 0.84
CHRNA3-202ENST00000348639 ANKRD36A6QL64 1941 aa20.3■□□□□ 0.84
CHRNA3-202ENST00000348639 PTPRSQ13332 1948 aa20.3■□□□□ 0.84
CHRNA3-202ENST00000348639 H3BMM5 538 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 C8AP07357 584 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 CDKN1CP49918 316 aaPredicted RBP20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 PEX6Q13608 980 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 OR4D1Q15615 310 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 CCDC6Q16204 474 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 MPP7Q5T2T1 576 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 RETSATQ6NUM9 610 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 LILRA6Q6PI73 481 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 PIANPQ8IYJ0 282 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 DEFB107AQ8IZN7 70 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 APCDD1Q8J025 514 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 FAM136AQ96C01 138 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 BIRC8Q96P09 236 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 MEAF6Q9HAF1 191 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 PLK2Q9NYY3 685 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 CFAP97Q9P2B7 532 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 G3BP2Q9UN86 482 aaKnown RBP20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 SH3BP1Q9Y3L3 701 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 PCDHB9Q9Y5E1 797 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 A0A1W2PRU2 124 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 LCHNA4D1U4 455 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 SUPT7LO94864 414 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 EPHB1P54762 984 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 HERC3Q15034 1050 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 UNC50Q53HI1 259 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 PSAPL1Q6NUJ1 521 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 PAQR3Q6TCH7 311 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 CCDC149Q6ZUS6 474 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 KIAA1191Q96A73 305 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 ACDQ96AP0 544 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 ATOH8Q96SQ7 321 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 ZBTB26Q9HCK0 441 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 CDH22Q9UJ99 828 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 FAM50BQ9Y247 325 aa20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 OAS3Q9Y6K5 1087 aaKnown RBP20.29■□□□□ 0.84
CHRNA3-202ENST00000348639 K7ERQ8 282 aa20.28■□□□□ 0.84
CHRNA3-202ENST00000348639 UBFD1O14562 309 aaKnown RBP20.28■□□□□ 0.84
CHRNA3-202ENST00000348639 ADH1AP07327 375 aa20.28■□□□□ 0.84
CHRNA3-202ENST00000348639 LINC00271P0C7V0 271 aa20.28■□□□□ 0.84
CHRNA3-202ENST00000348639 MTHFD2P13995 350 aa20.28■□□□□ 0.84
CHRNA3-202ENST00000348639 CD9P21926 228 aa20.28■□□□□ 0.84
CHRNA3-202ENST00000348639 INHBCP55103 352 aa20.28■□□□□ 0.84
CHRNA3-202ENST00000348639 SLC34A1Q06495 639 aa20.28■□□□□ 0.84
CHRNA3-202ENST00000348639 CYLC2Q14093 348 aaPredicted RBP20.28■□□□□ 0.84
CHRNA3-202ENST00000348639 PTPRRQ15256 657 aa20.28■□□□□ 0.84
CHRNA3-202ENST00000348639 ZRSR2Q15696 482 aaKnown RBP20.28■□□□□ 0.84
CHRNA3-202ENST00000348639 PTPRNQ16849 979 aa20.28■□□□□ 0.84
CHRNA3-202ENST00000348639 MPPE1Q53F39 396 aa20.28■□□□□ 0.84
CHRNA3-202ENST00000348639 TLDC1Q6P9B6 456 aa20.28■□□□□ 0.84
CHRNA3-202ENST00000348639 SNX32Q86XE0 403 aa20.28■□□□□ 0.84
CHRNA3-202ENST00000348639 BBS7Q8IWZ6 715 aa20.28■□□□□ 0.84
CHRNA3-202ENST00000348639 PELI3Q8N2H9 469 aa20.28■□□□□ 0.84
CHRNA3-202ENST00000348639 CORO1BQ9BR76 489 aa20.28■□□□□ 0.84
CHRNA3-202ENST00000348639 MAGEE1Q9HCI5 957 aa20.28■□□□□ 0.84
CHRNA3-202ENST00000348639 BPIFA1Q9NP55 256 aa20.28■□□□□ 0.84
CHRNA3-202ENST00000348639 FIS1Q9Y3D6 152 aa20.28■□□□□ 0.84
CHRNA3-202ENST00000348639 TRAF6Q9Y4K3 522 aa20.28■□□□□ 0.84
CHRNA3-202ENST00000348639 TRAV19A0A0A6YYK7 116 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 NRG2O14511 850 aaPredicted RBP20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 TBX10O75333 385 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 SKAP2O75563 359 aaPredicted RBP20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 PGLSO95336 258 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 PYGLP06737 847 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 PKMP14618 531 aaKnown RBP20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 CLCN4P51793 760 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 ATP6V0D1P61421 351 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 RAD51Q06609 339 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms