RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 SYT6Q5T7P8 510 aaPredicted RBP18.49■□□□□ 0.55
SMPD1-201ENST00000342245 TBPL2Q6SJ96 375 aa18.49■□□□□ 0.55
SMPD1-201ENST00000342245 METTL4Q8N3J2 472 aa18.49■□□□□ 0.55
SMPD1-201ENST00000342245 CERS5Q8N5B7 392 aa18.49■□□□□ 0.55
SMPD1-201ENST00000342245 RIPOR3Q96MK2 946 aa18.49■□□□□ 0.55
SMPD1-201ENST00000342245 C12orf4Q9NQ89 552 aa18.49■□□□□ 0.55
SMPD1-201ENST00000342245 MAP10Q9P2G4 905 aa18.49■□□□□ 0.55
SMPD1-201ENST00000342245 GMPR2Q9P2T1 348 aaKnown RBP18.49■□□□□ 0.55
SMPD1-201ENST00000342245 MRPS14O60783 128 aaKnown RBP18.49■□□□□ 0.55
SMPD1-201ENST00000342245 MAP3K6O95382 1288 aa18.49■□□□□ 0.55
SMPD1-201ENST00000342245 ATP5F1P24539 256 aaPredicted RBP18.49■□□□□ 0.55
SMPD1-201ENST00000342245 ACTR2P61160 394 aa18.49■□□□□ 0.55
SMPD1-201ENST00000342245 MVKQ03426 396 aa18.49■□□□□ 0.55
SMPD1-201ENST00000342245 EMX1Q04741 257 aaPredicted RBP18.49■□□□□ 0.55
SMPD1-201ENST00000342245 MTMR1Q13613 665 aa18.49■□□□□ 0.55
SMPD1-201ENST00000342245 CDC42EP5Q6NZY7 148 aa18.49■□□□□ 0.55
SMPD1-201ENST00000342245 CYP2S1Q96SQ9 504 aa18.49■□□□□ 0.55
SMPD1-201ENST00000342245 MRPL57Q9BQC6 102 aaKnown RBP18.49■□□□□ 0.55
SMPD1-201ENST00000342245 C2orf40Q9H1Z8 148 aa18.49■□□□□ 0.55
SMPD1-201ENST00000342245 BFARQ9NZS9 450 aa18.49■□□□□ 0.55
SMPD1-201ENST00000342245 XPR1Q9UBH6 696 aa18.49■□□□□ 0.55
SMPD1-201ENST00000342245 ACOT9Q9Y305 439 aa18.49■□□□□ 0.55
SMPD1-201ENST00000342245 CCDC154A6NI56 674 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 ZBTB7AO95365 584 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 PSAPP07602 524 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 GPX3P22352 226 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 SLC6A2P23975 617 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 CD68P34810 354 aaPredicted RBP18.48■□□□□ 0.55
SMPD1-201ENST00000342245 SURF1Q15526 300 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 PLEKHG6Q3KR16 790 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 BSPRYQ5W0U4 402 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 SCYL2Q6P3W7 929 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 GDPD3Q7L5L3 318 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 GLRX5Q86SX6 157 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 RETREG3Q86VR2 466 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 FUNDC1Q8IVP5 155 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 MAP6Q96JE9 813 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 GDF15Q99988 308 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 CCDC90BQ9GZT6 254 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 TOR3AQ9H497 397 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 PDLIM7Q9NR12 457 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 ACSS2Q9NR19 701 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 PCDHA9Q9Y5H5 950 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 THSD7AQ9UPZ6 1657 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 A0A0J9YYE9 177 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 IL32P24001 234 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 TGFB2P61812 414 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 GBE1Q04446 702 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 TRAF3Q13114 568 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 USP10Q14694 798 aaKnown RBP18.48■□□□□ 0.55
SMPD1-201ENST00000342245 SH3PXD2AQ5TCZ1 1133 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 CNSTQ6PJW8 725 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 TSPEARQ8WU66 669 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 CHURC1Q8WUH1 139 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 LRRC58Q96CX6 371 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 LGALS12Q96DT0 336 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 ZHX1-C8orf76Q96EF9 292 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 AGAP2Q99490 1192 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 SNRNP25Q9BV90 132 aaKnown RBP18.48■□□□□ 0.55
SMPD1-201ENST00000342245 RHOJQ9H4E5 214 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 ALG2Q9H553 416 aa18.48■□□□□ 0.55
SMPD1-201ENST00000342245 KAT8Q9H7Z6 458 aaKnown RBP18.48■□□□□ 0.55
SMPD1-201ENST00000342245 CLDN24A6NM45 220 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 CNTN5O94779 1100 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 NAT2P11245 290 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 RAP1GAPP47736 663 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 EEFSECP57772 596 aaKnown RBP18.47■□□□□ 0.55
SMPD1-201ENST00000342245 PCSK7Q16549 785 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 MEP1AQ16819 746 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 HHIPL2Q6UWX4 724 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 LARP4Q71RC2 724 aaKnown RBP eCLIP18.47■□□□□ 0.55
SMPD1-201ENST00000342245 KCNMB4Q86W47 210 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 ZC3HC1Q86WB0 502 aaKnown RBP18.47■□□□□ 0.55
SMPD1-201ENST00000342245 RIOX2Q8IUF8 465 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 BRSK2Q8IWQ3 736 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 PSD4Q8NDX1 1056 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 PJA1Q8NG27 643 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 SGCDQ92629 289 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 SLC39A13Q96H72 371 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 GGA3Q9NZ52 723 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 NUP50Q9UKX7 468 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 INTS6Q9UL03 887 aaKnown RBP18.47■□□□□ 0.55
SMPD1-201ENST00000342245 MKLN1Q9UL63 735 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 PNMA8CA0A1B0GUJ8 204 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 UNCXA6NJT0 531 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 MED26O95402 600 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 RYKP34925 604 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 DOK7Q18PE1 504 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 ZNF699Q32M78 642 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 CES3Q6UWW8 571 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 RIMKLAQ8IXN7 391 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 KCTD4Q8WVF5 259 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 SEPT1Q8WYJ6 367 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 ZFYVE19Q96K21 471 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 USE1Q9NZ43 259 aa18.47■□□□□ 0.55
SMPD1-201ENST00000342245 ZCWPW2A0A1B0GU75 182 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 NR5A2O00482 541 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 SNX2O60749 519 aa18.46■□□□□ 0.55
SMPD1-201ENST00000342245 ITGBL1O95965 494 aaPredicted RBP18.46■□□□□ 0.55
SMPD1-201ENST00000342245 ASPAP45381 313 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms