RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 PGAM4Q8N0Y7 254 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 BDH2Q9BUT1 245 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 GBA3Q9H227 469 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 CATSPERZQ9NTU4 200 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 UBA2Q9UBT2 640 aaPredicted RBP15.24■□□□□ 0.03
VARS2-201ENST00000321897 DNAJB4Q9UDY4 337 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 FBXW11Q9UKB1 542 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 UBXN8O00124 270 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 MAGEA8P43361 318 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 SLC18A1P54219 525 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 TMEM214Q6NUQ4 689 aaKnown RBP15.24■□□□□ 0.03
VARS2-201ENST00000321897 RIBC2Q9H4K1 309 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 FBXO44Q9H4M3 255 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 KLQ9UEF7 1012 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 ZDHHC2Q9UIJ5 367 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 TRAF6Q9Y4K3 522 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 ASCC3Q8N3C0 2202 aaKnown RBP15.24■□□□□ 0.03
VARS2-201ENST00000321897 CLASP2O75122 1294 aaKnown RBP15.24■□□□□ 0.03
VARS2-201ENST00000321897 AOC1P19801 751 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 RGS4P49798 205 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 INHBCP55103 352 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 RPS24P62847 133 aaKnown RBP15.24■□□□□ 0.03
VARS2-201ENST00000321897 TUSC3Q13454 348 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 INAQ16352 499 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 PLEKHA8Q96JA3 519 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 SMAD5Q99717 465 aaKnown RBP15.24■□□□□ 0.03
VARS2-201ENST00000321897 ADI1Q9BV57 179 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 TRIM54Q9BYV2 358 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 VPS45Q9NRW7 570 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 MIOSQ9NXC5 875 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 VTI1BQ9UEU0 232 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 EBF1Q9UH73 591 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 ARL5AQ9Y689 179 aa15.24■□□□□ 0.03
VARS2-201ENST00000321897 RAD51BO15315 384 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 HLA-DQB2P05538 268 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 CYP4B1P13584 511 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 ECT2LQ008S8 904 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 NOL9Q5SY16 702 aaKnown RBP15.23■□□□□ 0.03
VARS2-201ENST00000321897 ARMC12Q5T9G4 340 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 TMEM53Q6P2H8 277 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 CRTC3Q6UUV7 619 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 ZDHHC13Q8IUH4 622 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 NPWQ8N729 165 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 PPM1MQ96MI6 270 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 GKN1Q9NS71 199 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 ANAPC2Q9UJX6 822 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 FAM159BA6NKW6 160 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 K7EPI3 171 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 TFECO14948 347 aaPredicted RBP15.23■□□□□ 0.03
VARS2-201ENST00000321897 LRATO95237 230 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 NTRK1P04629 796 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 HECTD2Q5U5R9 776 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 CENPSQ8N2Z9 138 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 GRIN3AQ8TCU5 1115 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 SH3KBP1Q96B97 665 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 KCNK13Q9HB14 408 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 SNX8Q9Y5X2 465 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 CNTN5O94779 1100 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 TSHRP16473 764 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 EFNA1P20827 205 aaPredicted RBP15.23■□□□□ 0.03
VARS2-201ENST00000321897 CDK18Q07002 472 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 DNASE1L3Q13609 305 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 CPSF6Q16630 551 aaKnown RBP eCLIP15.23■□□□□ 0.03
VARS2-201ENST00000321897 BROXQ5VW32 411 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 FAM151BQ6UXP7 276 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 PIWIL4Q7Z3Z4 852 aaKnown RBP15.23■□□□□ 0.03
VARS2-201ENST00000321897 ZNF598Q86UK7 904 aaKnown RBP15.23■□□□□ 0.03
VARS2-201ENST00000321897 GATAD2AQ86YP4 633 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 FNDC8Q8TC99 324 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 CCDC126Q96EE4 140 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 CCDC106Q9BWC9 280 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 PARVBQ9HBI1 364 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 EVPLQ92817 2033 aa15.23■□□□□ 0.03
VARS2-201ENST00000321897 RBM47A0AV96 593 aaKnown RBP15.22■□□□□ 0.03
VARS2-201ENST00000321897 FBP2O00757 339 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 EI24O14681 340 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 ZSCAN9O15535 394 aaPredicted RBP15.22■□□□□ 0.03
VARS2-201ENST00000321897 ZBTB14O43829 449 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 CDH5P33151 784 aaPredicted RBP15.22■□□□□ 0.03
VARS2-201ENST00000321897 CLDN10P78369 228 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 SLC18A2Q05940 514 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 INCA1Q0VD86 236 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 FRG1Q14331 258 aaKnown RBP15.22■□□□□ 0.03
VARS2-201ENST00000321897 TCEAL1Q15170 157 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 SPRYD7Q5W111 196 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 PRSS55Q6UWB4 352 aaPredicted RBP15.22■□□□□ 0.03
VARS2-201ENST00000321897 PAGE2Q7Z2X7 111 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 LZTR1Q8N653 840 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 DEPDC7Q96QD5 511 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 RIC8BQ9NVN3 520 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 IGKV6D-21A0A0A0MT36 114 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 GLTPD2A6NH11 291 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 ZBTB42B2RXF5 422 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 E7ENX8 843 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 H3BMM5 538 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 NDUFB5O43674 189 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 HLA-DPA1P20036 260 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 IL4RP24394 825 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 EDNRBP24530 442 aa15.22■□□□□ 0.03
VARS2-201ENST00000321897 HALP42357 657 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms