RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 CORINQ9Y5Q5 1042 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 MN1Q10571 1320 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-201ENST00000316707 PHLPP1O60346 1717 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 DOT1LQ8TEK3 1739 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 FAM172BPA6NC97 362 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 ARNTLO00327 626 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 GNGT2O14610 69 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 SOAT2O75908 522 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 CHRNA1P02708 482 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 MMP10P09238 476 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 HGFP14210 728 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 OPRL1P41146 370 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 C1QTNF8P60827 252 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 HERVK_113P63132 956 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.77□□□□□ -1.65
PTPN13-201ENST00000316707 NME3Q13232 169 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 VPS26BQ4G0F5 336 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 RAB6CQ53S08 254 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 PIGZQ86VD9 579 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 HID1Q8IV36 788 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 KBTBD8Q8NFY9 601 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 OR52E4Q8NGH9 312 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 ITFG1Q8TB96 612 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 ATL1Q8WXF7 558 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 ZBTB18Q99592 522 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 TBL1YQ9BQ87 522 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 ERVK-6Q9BXR3 956 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 RAB6CQ9H0N0 254 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 TPK1Q9H3S4 243 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 TM9SF3Q9HD45 589 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 TMEM233B4DJY2 109 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 M0QYT0 321 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 SNAP29O95721 258 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 NFKBIAP25963 317 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 AKT1P31749 480 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 PRIM2P49643 509 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 ARHGDIAP52565 204 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 CD47Q08722 323 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 SEMA3BQ13214 749 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 SOWAHAQ2M3V2 549 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 ZNF181Q2M3W8 571 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 SLC2A7Q6PXP3 512 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 R3HCC1LQ7Z5L2 792 aaKnown RBP4.77□□□□□ -1.65
PTPN13-201ENST00000316707 HEATR4Q86WZ0 1026 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 MICU2Q8IYU8 434 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 ZNF280CQ8ND82 737 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 HMGCLL1Q8TB92 370 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 MUL1Q969V5 352 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 ARNT2Q9HBZ2 717 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 GLOD4Q9HC38 313 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 MAP10Q9P2G4 905 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 CACNG3O60359 315 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 EEDO75530 441 aaKnown RBP4.77□□□□□ -1.65
PTPN13-201ENST00000316707 SLC22A3O75751 556 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 RECQL5O94762 991 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-201ENST00000316707 PRKD3O94806 890 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 RYKP34925 604 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 HUNKP57058 714 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 SELPLGQ14242 412 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 Q3C1V9 767 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 TREML2Q5T2D2 321 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 GLYATQ6IB77 296 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 BEND5Q7L4P6 421 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 GALNT13Q8IUC8 556 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 KIAA2013Q8IYS2 634 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 RHEBL1Q8TAI7 183 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 PGAP3Q96FM1 320 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-201ENST00000316707 PIH1D1Q9NWS0 290 aaKnown RBP4.77□□□□□ -1.65
PTPN13-201ENST00000316707 PAK1IP1Q9NWT1 392 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-201ENST00000316707 PEX16Q9Y5Y5 336 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 FAM25AB3EWG3 89 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 FAM25CB3EWG5 89 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 FAM25GB3EWG6 89 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 HUS1O60921 280 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 KCNH1O95259 989 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 ZNF45Q02386 682 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 SULT1C3Q6IMI6 304 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 TIGD7Q6NT04 549 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-201ENST00000316707 TTC23LQ6PF05 361 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 PLD3Q8IV08 490 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 FAM9CQ8IZT9 166 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 OR9I1Q8NGQ6 314 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 IPCEF1Q8WWN9 437 aaPredicted RBP4.77□□□□□ -1.65
PTPN13-201ENST00000316707 ZNF566Q969W8 418 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 TMEM125Q96AQ2 219 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 SLC2A13Q96QE2 648 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 PCYT2Q99447 389 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 FSD1LQ9BXM9 530 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 LHPPQ9H008 270 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 TRIT1Q9H3H1 467 aaKnown RBP4.77□□□□□ -1.65
PTPN13-201ENST00000316707 CDH9Q9ULB4 789 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 ERVW-1Q9UQF0 538 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 VPS9D1Q9Y2B5 631 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 ANGPTL3Q9Y5C1 460 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 DNAJC15Q9Y5T4 150 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 ITGB4P16144 1822 aa4.77□□□□□ -1.65
PTPN13-201ENST00000316707 FAM234BA2RU67 622 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 B4GALT5O43286 388 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 CNTN5O94779 1100 aa4.76□□□□□ -1.65
PTPN13-201ENST00000316707 ALPLP05186 524 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms