RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 ZNF618Q5T7W0 954 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 RAET1GQ6H3X3 334 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 PROSER1Q86XN7 944 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 C8orf59Q8N0T1 100 aaPredicted RBP16.7■□□□□ 0.26
PHRF1-201ENST00000264555 MPP4Q96JB8 637 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 NPY6RQ99463 290 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 BRD9Q9H8M2 597 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 KCTD5Q9NXV2 234 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 RPS6KA6Q9UK32 745 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 LZTS1Q9Y250 596 aa16.7■□□□□ 0.26
PHRF1-201ENST00000264555 C1QTNF3-AMACRE9PGA6 284 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 OGNP20774 298 aaKnown RBP16.69■□□□□ 0.26
PHRF1-201ENST00000264555 GHRHRQ02643 423 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 TRIM60Q495X7 471 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 GPR180Q86V85 440 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 DPF3Q92784 378 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 OSBPL11Q9BXB4 747 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 PLK2Q9NYY3 685 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 EVLQ9UI08 416 aaPredicted RBP16.69■□□□□ 0.26
PHRF1-201ENST00000264555 HCRTO43612 131 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 RASSF9O75901 435 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 LCP2Q13094 533 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 NEDD8Q15843 81 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 INTS11Q5TA45 600 aaKnown RBP16.69■□□□□ 0.26
PHRF1-201ENST00000264555 LINGO4Q6UY18 593 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 KRT78Q8N1N4 520 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 FBXO22Q8NEZ5 403 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 CACNG4Q9UBN1 327 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 PCDHGC4Q9Y5F7 938 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 SOX6P35712 828 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 AP1S1P61966 158 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 TIGD2Q4W5G0 525 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 WDTC1Q8N5D0 677 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 EMID1Q96A84 441 aaPredicted RBP16.69■□□□□ 0.26
PHRF1-201ENST00000264555 GRIP2Q9C0E4 1043 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 CAPN10Q9HC96 672 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 A0A1W2PQ67 120 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 GSTM1P09488 218 aa16.69■□□□□ 0.26
PHRF1-201ENST00000264555 PSMB9P28065 219 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 SPAM1P38567 509 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 GAD2Q05329 585 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 ABRQ12979 859 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 SERPINA13PQ6UXR4 307 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 UBE2R2Q712K3 238 aaPredicted RBP16.68■□□□□ 0.26
PHRF1-201ENST00000264555 FEM1CQ96JP0 617 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 TELO2Q9Y4R8 837 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 USP54Q70EL1 1684 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 SNAP91O60641 907 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 RPL3P39023 403 aaKnown RBP16.68■□□□□ 0.26
PHRF1-201ENST00000264555 CLCQ05315 142 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 POM121L1PQ3SYA9 428 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 AMIGO2Q86SJ2 522 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 TCAIMQ8N3R3 496 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 CPSF7Q8N684 471 aaKnown RBP16.68■□□□□ 0.26
PHRF1-201ENST00000264555 BBS4Q96RK4 519 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 NUDT4Q9NZJ9 180 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 DUSP12Q9UNI6 340 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 KCNE2Q9Y6J6 123 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 NEDD8-MDP1E9PL57 170 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 KLF11O14901 512 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 SLC18A2Q05940 514 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 RFTN1Q14699 578 aaPredicted RBP16.68■□□□□ 0.26
PHRF1-201ENST00000264555 ADCY4Q8NFM4 1077 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 TSPAN14Q8NG11 270 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 RORBQ92753 470 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 NELL1Q92832 810 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 CORO2BQ9UQ03 480 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 BCL10O95999 233 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 ZNF460Q14592 562 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 TRIM16LQ309B1 348 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 ATAD3BQ5T9A4 648 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 ZBTB2Q8N680 514 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 ITCHQ96J02 903 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 SMOQ99835 787 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 TBC1D14Q9P2M4 693 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 GUCY1B2O75343 617 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 PABPC1P11940 636 aaKnown RBP16.68■□□□□ 0.26
PHRF1-201ENST00000264555 PAX7P23759 505 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 PRKCHP24723 683 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 SERPINB1P30740 379 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 TTKP33981 857 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 CXCR3P49682 368 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 TAF1AQ15573 450 aaPredicted RBP16.68■□□□□ 0.26
PHRF1-201ENST00000264555 ZBED3Q96IU2 234 aaPredicted RBP16.68■□□□□ 0.26
PHRF1-201ENST00000264555 OR52E6Q96RD3 313 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 INTS10Q9NVR2 710 aaKnown RBP16.68■□□□□ 0.26
PHRF1-201ENST00000264555 NCKAP1Q9Y2A7 1128 aa16.68■□□□□ 0.26
PHRF1-201ENST00000264555 POLR3HQ9Y535 204 aaPredicted RBP16.68■□□□□ 0.26
PHRF1-201ENST00000264555 HLA-DQB2P05538 268 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 UQCRBP14927 111 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 CACUL1Q86Y37 369 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 ASZ1Q8WWH4 475 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 CAPNS2Q96L46 248 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 MRPS26Q9BYN8 205 aaKnown RBP16.67■□□□□ 0.26
PHRF1-201ENST00000264555 EGFL7Q9UHF1 273 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 KLHL20Q9Y2M5 609 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 AP4B1Q9Y6B7 739 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 INHAP05111 366 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 CRATP43155 626 aa16.67■□□□□ 0.26
PHRF1-201ENST00000264555 RPL5P46777 297 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms