RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 LMAN2LQ9H0V9 348 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 GPR89AB7ZAQ6 455 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SERPINI2O75830 405 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 OR6A2O95222 327 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 VAPBO95292 243 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 GPR89BP0CG08 455 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 AMPD1P23109 780 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SLC6A2P23975 617 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 BUD31P41223 144 aaPredicted RBP4.31□□□□□ -1.72
VPS13C-202ENST00000261517 MAGEA8P43361 318 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 GNPDA1P46926 289 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 LIMK2P53671 638 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 LARS2Q15031 903 aaKnown RBP4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SPIN4Q56A73 249 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 OTOP3Q7RTS5 596 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 PRELID2Q8N945 189 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 PRCCQ92733 491 aaPredicted RBP4.31□□□□□ -1.72
VPS13C-202ENST00000261517 DPF3Q92784 378 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 FCRL5Q96RD9 977 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SLC4A5Q9BY07 1137 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 TRIM10Q9UDY6 481 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 RAPGEFL1Q9UHV5 662 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 INSL6Q9Y581 213 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 E9PBE3 544 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 ATG7O95352 703 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 CAPGP40121 348 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 DLG4P78352 724 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SEMA5AQ13591 1074 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 TRABD2AQ86V40 505 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 XYLT1Q86Y38 959 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 GSPT2Q8IYD1 628 aaKnown RBP4.31□□□□□ -1.72
VPS13C-202ENST00000261517 ZNF641Q96N77 438 aaPredicted RBP4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SH3GL2Q99962 352 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 MAN2B2Q9Y2E5 1009 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 TCAF1Q9Y4C2 921 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 C4AP0C0L4 1744 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 PHIPQ8WWQ0 1821 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 IGLV3-22A0A075B6J6 115 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 TGFB1I1O43294 461 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 VEGFDO43915 354 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SNX3O60493 162 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 GNSP15586 552 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 AKT2P31751 481 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 HNF4AP41235 474 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 ATP4BP51164 291 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SLC1A5Q15758 541 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 PGAM4Q8N0Y7 254 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 CLEC4DQ8WXI8 215 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SEMA3CQ99985 751 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SEMA4AQ9H3S1 761 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 KLHL42Q9P2K6 505 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 PRKAG3Q9UGI9 489 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 GTF2IRD1Q9UHL9 959 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SMIM28A0A1B0GU29 152 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 TLL1O43897 1013 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 PAGE1O75459 146 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SLC22A3O75751 556 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 ADH1BP00325 375 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 PENKP01210 267 aaPredicted RBP4.31□□□□□ -1.72
VPS13C-202ENST00000261517 BGNP21810 368 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 PSMB4P28070 264 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 FUT10Q6P4F1 479 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 GJB7Q6PEY0 223 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 TMPRSS11AQ6ZMR5 421 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 FAM228AQ86W67 206 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SCML4Q8N228 414 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 HM13Q8TCT9 377 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 C17orf62Q9BQA9 187 aa4.31□□□□□ -1.72
VPS13C-202ENST00000261517 GPN3Q9UHW5 284 aaPredicted RBP4.31□□□□□ -1.72
VPS13C-202ENST00000261517 SSC5DA1L4H1 1573 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 LILRB3O75022 631 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 TRIM3O75382 744 aaPredicted RBP4.3□□□□□ -1.72
VPS13C-202ENST00000261517 REM1O75628 298 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 NOS3P29474 1203 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 GRIK2Q13002 908 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 MYBPC3Q14896 1274 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 NDUFAF6Q330K2 333 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 TAPT1Q6NXT6 567 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 MAMDC4Q6UXC1 1216 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 TIFABQ6ZNK6 161 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 AHI1Q8N157 1196 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 ZBTB2Q8N680 514 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 MED8Q96G25 268 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 NEDD4LQ96PU5 975 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 SLC4A9Q96Q91 983 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 POP1Q99575 1024 aaKnown RBP4.3□□□□□ -1.72
VPS13C-202ENST00000261517 HINFPQ9BQA5 517 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 EFCAB11Q9BUY7 163 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 PITHD1Q9GZP4 211 aaPredicted RBP4.3□□□□□ -1.72
VPS13C-202ENST00000261517 SDCBP2Q9H190 292 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 ERGIC3Q9Y282 383 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 BCORQ6W2J9 1755 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 TPP1O14773 563 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 INSIG1O15503 277 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 TBL1XO60907 577 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 TRIQKQ629K1 86 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 TMEM154Q6P9G4 183 aa4.3□□□□□ -1.72
VPS13C-202ENST00000261517 CXXC5Q7LFL8 322 aaKnown RBP4.3□□□□□ -1.72
VPS13C-202ENST00000261517 PTAR1Q7Z6K3 402 aaPredicted RBP4.3□□□□□ -1.72
VPS13C-202ENST00000261517 PXYLP1Q8TE99 480 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms