RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 CNOT3O75175 753 aaKnown RBP13.72□□□□□ -0.21
NFKB1-201ENST00000226574 ZNF132P52740 706 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 ARMC4Q5T2S8 1044 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 DCLRE1AQ6PJP8 1040 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 CLEC20AQ6ZU45 233 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 SLCO6A1Q86UG4 719 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 OR7D4Q8NG98 312 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 OR10A6Q8NH74 314 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 CCDC28BQ9BUN5 200 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 PCDH12Q9NPG4 1184 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 H3BN98 237 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 ZNF7P17097 686 aaPredicted RBP13.72□□□□□ -0.21
NFKB1-201ENST00000226574 MSH3P20585 1137 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 RPL10P27635 214 aaKnown RBP13.72□□□□□ -0.21
NFKB1-201ENST00000226574 ALDH7A1P49419 539 aaKnown RBP13.72□□□□□ -0.21
NFKB1-201ENST00000226574 CLCQ05315 142 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 ATG14Q6ZNE5 492 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 ZNF554Q86TJ5 538 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 TRIM74Q86UV6 250 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 TRIM73Q86UV7 250 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 CROCCP3Q8IVE0 287 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 GPR156Q8NFN8 814 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 LZICQ8WZA0 190 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 BCO2Q9BYV7 579 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 FBXO44Q9H4M3 255 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 AKTIPQ9H8T0 292 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 ATAD3AQ9NVI7 634 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 C3orf18Q9UK00 162 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 STYXL1Q9Y6J8 313 aa13.72□□□□□ -0.21
NFKB1-201ENST00000226574 MAGEB3O15480 346 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 BEST1O76090 585 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 CHRM5P08912 532 aaPredicted RBP13.71□□□□□ -0.21
NFKB1-201ENST00000226574 IDO1P14902 403 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 DGKQP52824 942 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 MAP3K10Q02779 954 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 TYW3Q6IPR3 259 aaKnown RBP13.71□□□□□ -0.21
NFKB1-201ENST00000226574 B3GNT9Q6UX72 402 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 RASAL3Q86YV0 1011 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 ADHFE1Q8IWW8 467 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 ZFP28Q8NHY6 868 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 MLPHQ9BV36 600 aaPredicted RBP13.71□□□□□ -0.21
NFKB1-201ENST00000226574 IGSF9Q9P2J2 1179 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 KANSL3Q9P2N6 904 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 EIF2B4Q9UI10 523 aaKnown RBP13.71□□□□□ -0.21
NFKB1-201ENST00000226574 A8MT66 165 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 TFECO14948 347 aaPredicted RBP13.71□□□□□ -0.21
NFKB1-201ENST00000226574 FGF10O15520 208 aaPredicted RBP13.71□□□□□ -0.21
NFKB1-201ENST00000226574 TLR5O60602 858 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 MC4RP32245 332 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 STT3AP46977 705 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 ATN1P54259 1190 aaPredicted RBP13.71□□□□□ -0.21
NFKB1-201ENST00000226574 MS4A2Q01362 244 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 SLC10A7Q0GE19 358 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 TRAF3Q13114 568 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 LAPTM4AQ15012 233 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 CRY1Q16526 586 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 TMEM86AQ8N2M4 240 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 SLC16A10Q8TF71 515 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 FOPNLQ96NB1 174 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 CNOT6Q9ULM6 557 aaKnown RBP13.71□□□□□ -0.21
NFKB1-201ENST00000226574 DUSP12Q9UNI6 340 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 TPRKBQ9Y3C4 175 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 SAMHD1Q9Y3Z3 626 aaKnown RBP13.71□□□□□ -0.21
NFKB1-201ENST00000226574 ARL5AQ9Y689 179 aa13.71□□□□□ -0.21
NFKB1-201ENST00000226574 ASCC3Q8N3C0 2202 aaKnown RBP13.71□□□□□ -0.21
NFKB1-201ENST00000226574 G3V2T6 193 aa13.71□□□□□ -0.22
NFKB1-201ENST00000226574 ENPP3O14638 875 aa13.71□□□□□ -0.22
NFKB1-201ENST00000226574 RSL1D1O76021 490 aaKnown RBP13.71□□□□□ -0.22
NFKB1-201ENST00000226574 FADS2O95864 444 aaKnown RBP13.71□□□□□ -0.22
NFKB1-201ENST00000226574 EPB42P16452 691 aa13.71□□□□□ -0.22
NFKB1-201ENST00000226574 HSPA7P48741 367 aa13.71□□□□□ -0.22
NFKB1-201ENST00000226574 CASP9P55211 416 aa13.71□□□□□ -0.22
NFKB1-201ENST00000226574 GK3PQ14409 553 aa13.71□□□□□ -0.22
NFKB1-201ENST00000226574 DGUOKQ16854 277 aa13.71□□□□□ -0.22
NFKB1-201ENST00000226574 MYLK3Q32MK0 819 aa13.71□□□□□ -0.22
NFKB1-201ENST00000226574 FGD3Q5JSP0 725 aa13.71□□□□□ -0.22
NFKB1-201ENST00000226574 RNF19BQ6ZMZ0 732 aa13.71□□□□□ -0.22
NFKB1-201ENST00000226574 SPNS2Q8IVW8 549 aa13.71□□□□□ -0.22
NFKB1-201ENST00000226574 CPNE9Q8IYJ1 553 aa13.71□□□□□ -0.22
NFKB1-201ENST00000226574 TXNDC5Q8NBS9 432 aaKnown RBP13.71□□□□□ -0.22
NFKB1-201ENST00000226574 SHKBP1Q8TBC3 707 aa13.71□□□□□ -0.22
NFKB1-201ENST00000226574 ZHX1-C8orf76Q96EF9 292 aa13.71□□□□□ -0.22
NFKB1-201ENST00000226574 REXO5Q96IC2 774 aaKnown RBP13.71□□□□□ -0.22
NFKB1-201ENST00000226574 HNRNPABQ99729 332 aaKnown RBP13.71□□□□□ -0.22
NFKB1-201ENST00000226574 TRPM5Q9NZQ8 1165 aa13.71□□□□□ -0.22
NFKB1-201ENST00000226574 GALPQ9UBC7 116 aa13.71□□□□□ -0.22
NFKB1-201ENST00000226574 LSM7Q9UK45 103 aaKnown RBP13.71□□□□□ -0.22
NFKB1-201ENST00000226574 FBXW11Q9UKB1 542 aa13.71□□□□□ -0.22
NFKB1-201ENST00000226574 C4AP0C0L4 1744 aa13.71□□□□□ -0.22
NFKB1-201ENST00000226574 C4BP0C0L5 1744 aa13.71□□□□□ -0.22
NFKB1-201ENST00000226574 NUP188Q5SRE5 1749 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 LRRC14BA6NHZ5 514 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 ANXA6P08133 673 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 JAK1P23458 1154 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 TKTP29401 623 aaKnown RBP13.7□□□□□ -0.22
NFKB1-201ENST00000226574 IFNA8P32881 189 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 CHI3L1P36222 383 aaPredicted RBP13.7□□□□□ -0.22
NFKB1-201ENST00000226574 CREB5Q02930 508 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 IQSEC1Q6DN90 963 aa13.7□□□□□ -0.22
NFKB1-201ENST00000226574 SYT12Q8IV01 421 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms