RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Ankrd27Q3UMR0 1048 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Smarcd1Q61466 515 aaKnown RBP18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Sytl5Q80T23 753 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Pggt1bQ8BUY9 377 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Nrip1Q8CBD1 1161 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Rnf31Q924T7 1066 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Mat2bQ99LB6 334 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Lgals2Q9CQW5 130 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Mrpl17Q9D8P4 176 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Slamf1Q9QUM4 343 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Malrd1A2AJX4 2123 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Gm10717D3Z1I8 228 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Gm2832F7AEC7 200 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Vmn1r76F8VQ63 324 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Eno3P21550 434 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Aff3P51827 1254 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Txnl4aP83877 142 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Pld2P97813 933 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 UcmaQ14BU0 138 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Col28a1Q2UY11 1141 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 HexdcQ3U4H6 486 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Gm5431Q5NCB3 844 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Kctd12Q6WVG3 327 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Ints7Q7TQK1 966 aaKnown RBP18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Rbm12Q8R4X3 992 aaKnown RBP18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Chrnb2Q9ERK7 501 aa18.3■□□□□ 0.52
Trim47-202ENSMUST00000106441 Olfr1049A2ARZ0 308 aa18.29■□□□□ 0.52
Trim47-202ENSMUST00000106441 Eif2b3B1AUN2 452 aaKnown RBP18.29■□□□□ 0.52
Trim47-202ENSMUST00000106441 Arfip1G5E8V9 373 aa18.29■□□□□ 0.52
Trim47-202ENSMUST00000106441 Rhox2gL7MUB9 191 aa18.29■□□□□ 0.52
Trim47-202ENSMUST00000106441 HcrtO55241 130 aa18.29■□□□□ 0.52
Trim47-202ENSMUST00000106441 Ckmt1P30275 418 aaKnown RBP18.29■□□□□ 0.52
Trim47-202ENSMUST00000106441 Adra1dP97714 562 aa18.29■□□□□ 0.52
Trim47-202ENSMUST00000106441 Mc1rQ01727 315 aa18.29■□□□□ 0.52
Trim47-202ENSMUST00000106441 Ankrd13bQ5F259 626 aa18.29■□□□□ 0.52
Trim47-202ENSMUST00000106441 Khdrbs1Q60749 443 aaKnown RBP18.29■□□□□ 0.52
Trim47-202ENSMUST00000106441 Olfr8Q60892 310 aa18.29■□□□□ 0.52
Trim47-202ENSMUST00000106441 Rslcan18Q7M6X5 460 aa18.29■□□□□ 0.52
Trim47-202ENSMUST00000106441 Sfrp1Q8C4U3 314 aa18.29■□□□□ 0.52
Trim47-202ENSMUST00000106441 Wnt9aQ8R5M2 365 aa18.29■□□□□ 0.52
Trim47-202ENSMUST00000106441 Ppp1r2Q9DCL8 206 aa18.29■□□□□ 0.52
Trim47-202ENSMUST00000106441 Zfp472B0V2W5 534 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Galnt1O08912 559 aaKnown RBP18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Nudt1P53368 156 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Cyp2a12P56593 492 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Fubp3Q3TIX6 575 aaKnown RBP18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Gm4981Q3ULJ8 291 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Lsmem1Q3UQS2 128 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Olfr1037Q7TR84 321 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Trim62Q80V85 475 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Rmdn2Q8BSE0 410 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Adamts2Q8C9W3 1213 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Nsl1Q8K305 281 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Fbxo21Q8VDH1 627 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Serpina3nQ91WP6 418 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Sntg2Q925E0 539 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 4930524N10RikQ9D519 233 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 P2yr13Q9D8I2 337 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Maged2Q9ER67 616 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Smpd3Q9JJY3 655 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Trpc4Q9QUQ5 974 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Trpc7Q9WVC5 862 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Dnah12Q3V0Q1 3086 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Pate1E9Q658 125 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 2610028H24RikG5E8K1 270 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 NmbrO54799 390 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Psma3O70435 255 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 PdgfrbP05622 1098 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Npr1P18293 1057 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 InhbcP55104 352 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Tuba4aP68368 448 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Rbp1Q00915 135 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Fam171bQ14CH0 825 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 TchpQ3TVW5 497 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Cog7Q3UM29 770 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Rbm44Q3V089 1013 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Q3V0E1 1183 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 H2-Q2Q4KN81 360 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Serpina3gQ5I2A0 440 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Tnfaip2Q61333 691 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 RadilQ69Z89 1099 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Gpr142Q7TQN9 365 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Olfr867Q7TRF3 331 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Trit1Q80UN9 467 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Mfn1Q811U4 741 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Hspa13Q8BM72 471 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 PvrQ8K094 408 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Pcdhga10Q91XY9 930 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Trim8Q99PJ2 551 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Pih1d1Q9CQJ2 290 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Tmem80Q9D3H0 123 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Hormad1Q9D5T7 392 aa18.28■□□□□ 0.52
Trim47-202ENSMUST00000106441 Mtx3D3YTP3 312 aa18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Zfp384E9Q1A5 584 aaKnown RBP18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Znf683I7HJS4 458 aa18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Fgf10O35565 209 aa18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Gpc4P51655 557 aa18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Serpinb5P70124 375 aaKnown RBP18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Hrh2P97292 397 aa18.27■□□□□ 0.52
Trim47-202ENSMUST00000106441 Gsdmc2Q2KHK6 480 aa18.27■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 45.6 ms