RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Tdp1Q8BJ37 609 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 CenpxQ8C4X1 78 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Asb6Q91ZU1 418 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Slc12a9Q99MR3 914 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Oser1Q9D722 291 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Erp27Q9D8U3 272 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Tlr6Q9EPW9 795 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Ubqln2Q9QZM0 638 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Coro1cQ9WUM4 474 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Ric1Q69ZJ7 1422 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Slfn3A0A1L1STQ7 640 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Gm27029A2A4P4 543 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Bclaf3A2AG58 752 aaKnown RBP9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Kng1O08677 661 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Dpysl4O35098 572 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Cd68P31996 326 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Ldb1P70662 411 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Itga1Q3V3R4 1179 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Cd34Q64314 382 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Ubp1Q811S7 540 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Il17reQ8BH06 637 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Exoc3l1Q8BI71 739 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 HnrnpabQ99020 285 aaKnown RBP9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Fam212aQ9CX62 282 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Abca17E9PX95 1733 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Olfr1040A2ARY1 313 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Gm16506F7ANP4 213 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Dgcr6O35347 198 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Prom2Q3UUY6 835 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Tmem151bQ68FE7 561 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Mon1aQ6PDG8 556 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 PpatQ8CIH9 517 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Cyp2j9Q924D1 502 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Mad2l1Q9Z1B5 205 aa9.36□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Gm5145F8VQ88 278 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Nkx1-1G3UXB3 402 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Tnfrsf11aO35305 625 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Q32M26 199 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Tapt1Q4VBD2 564 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Atl1Q8BH66 558 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Rbms3Q8BWL5 431 aaKnown RBP9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Nuak2Q8BZN4 639 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Pcdhga9Q91XX9 932 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Ecrg4Q99LS0 148 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Fars2Q99M01 451 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Tsga13Q9DA17 273 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Vmn2r25W4VSP2 855 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Fam46dB1ATX6 390 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 D3Z070 196 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Ptar1E9QAB6 424 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Gm7945F6QI24 236 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Cd4P06332 457 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Clca4bQ3UW98 925 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Arnt2Q61324 712 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Ndrg1Q62433 394 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Stfa2l1Q8BWM3 103 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Rbm4Q8C7Q4 361 aaKnown RBP9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Zfp62Q8C827 914 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Rbm4bQ8VE92 357 aaKnown RBP9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Olfr385Q8VGT1 312 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Setd7Q8VHL1 366 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Lsm12Q9D0R8 195 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Prdm15E9Q8T2 1174 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Vmn1r39G3UWE6 305 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Gm17174M0QWQ9 212 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Barx2O08686 283 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 PbsnO08976 174 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 H2-M9O19442 342 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Sypl2O89104 264 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 En2P09066 324 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Cdh5P55284 784 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Mapre3Q6PER3 281 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 MafaQ8CF90 359 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Prl2b1Q9DAZ2 228 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Il22Q9JJY9 179 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Arl10Q9QXJ4 243 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Htatip2Q9Z2G9 242 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Zfp969A2ART2 485 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Zfp973A2BE20 318 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Rhox13F6YCR7 232 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Dcpp3L7N259 170 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Tnfrsf18O35714 228 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Psmb10O35955 273 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 EporP14753 507 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Stx4P70452 298 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Gja5Q01231 358 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Bbs1Q3V3N7 593 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Pih1d2Q8CHR9 315 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Pdcd10Q8VE70 212 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Pcdhgb2Q91XX7 928 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Anks3Q9CZK6 655 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Grm3Q9QYS2 879 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Aldoart1A6ZI46 419 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Slc6a2O55192 617 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Tas2r106Q7M724 308 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Ldhal6bQ8BVP2 382 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Q8BWQ6 963 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Q8CCC3 530 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Olfr356Q8VFP5 315 aa9.35□□□□□ -0.91
Prpf40a-201ENSMUST00000076313 Exoc2Q9D4H1 924 aa9.35□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms