RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Zfp558E9Q1J0 407 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 GzmkO35205 263 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Psmb9P28076 219 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 UcmaQ14BU0 138 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Slc22a15Q504N2 544 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Magee2Q52KG3 523 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Afap1l2Q5DTU0 825 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Kcnh1Q60603 989 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Krt75Q8BGZ7 551 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Tprg1Q8CB49 279 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Fem1cQ8CEF1 617 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gin1Q8K259 518 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Usp45Q8K387 813 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Olfr866Q8VFI7 312 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 NpntQ91V88 561 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Dio3Q91ZI8 304 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 PrkxQ922R0 355 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Ifi44lQ9BDB7 447 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Q9D1K7 174 aaKnown RBP13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 MrrfQ9D6S7 262 aaKnown RBP13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Sh2d4aQ9D7V1 421 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Scamp5Q9JKD3 235 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Ninj2Q9JL89 143 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Scn10aQ6QIY3 1958 aa13.42□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gm10717D3Z1I8 228 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gm3636E9Q5P1 227 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Slc9a3G3X939 829 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Stam2O88811 523 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 GemP55041 295 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 PepdQ11136 493 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gsdmc2Q2KHK6 480 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Ankrd27Q3UMR0 1048 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Akr1clQ3UXL1 322 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Defa17Q64016 82 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Ifit3Q64345 403 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 AtminQ6P9S1 818 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Cd300lfQ6SJQ7 337 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Olfr1415Q7TQS4 311 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Olfr867Q7TRF3 331 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Mrps35Q8BJZ4 320 aaKnown RBP13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 NcaphQ8C156 731 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Bend5Q8C6D4 421 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gsdmc3Q8CB12 480 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Pi4k2bQ8CBQ5 469 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Spdye4bQ8CDE8 236 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Vps50Q8CI71 964 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Ugt2b34Q8K154 532 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Olfr1416Q8VGU4 312 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Olfr570Q8VH12 312 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Mark1Q8VHJ5 795 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Q922R1 422 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 CinpQ9D0V8 212 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Tmem80Q9D3H0 123 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Apbb2Q9DBR4 760 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Slc28a3Q9ERH8 703 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 NckipsdQ9ESJ4 714 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Ifi30Q9ESY9 248 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Jam2Q9JI59 298 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Il22bQ9JJY8 179 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Fbxo16Q9QZM9 334 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gsk3bQ9WV60 420 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Ttc3O88196 1979 aaKnown RBP13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Zfp985A2A7A5 519 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gm17175E9Q528 179 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gm20828J3KMI7 228 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Galnt1O08912 559 aaKnown RBP13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Cldn5O54942 218 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Tpst1O70281 370 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 ErfP70459 551 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Rsrp1Q3UC65 298 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Zbtb8osQ505B7 168 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Q5XFZ0 217 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Eps15l1Q60902 907 aaKnown RBP13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Lrrc8eQ66JT1 795 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Rab3ipQ68EF0 428 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Zzz3Q6KAQ7 910 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Rps9Q6ZWN5 194 aaKnown RBP13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Cdkn2aipQ8BI72 563 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Snx17Q8BVL3 470 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 TbccQ8VCN9 341 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Tbc1d19Q8VDV7 526 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Pcdhb11Q91UZ8 797 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Srfbp1Q9CZ91 441 aaKnown RBP13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Ndufaf4Q9D1H6 173 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 4930524N10RikQ9D519 233 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Vps35Q9EQH3 796 aaKnown RBP13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Kat2bQ9JHD1 813 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Rfc2Q9WUK4 349 aaKnown RBP13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Padi4Q9Z183 666 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gria3Q9Z2W9 888 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Osbpl10S4R1M9 766 aa13.41□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gm21293E9Q4G9 266 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Gm4847G3X946 537 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Slc6a20bO88575 635 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Cdh1P09803 884 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Zfp14P10755 501 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Lamp1P11438 406 aaKnown RBP13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Ndst2P52850 883 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Pim3P58750 326 aa13.4□□□□□ -0.26
Nup88-201ENSMUST00000035283 Psme2P97372 239 aa13.4□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms