RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Atat1Q8K341 421 aa12.03□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Hkdc1Q91W97 915 aa12.03□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Pcdhga9Q91XX9 932 aa12.03□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Slc22a17Q9D9E0 401 aa12.03□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Ddx59Q9DBN9 619 aa12.03□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Rpl38Q9JJI8 70 aaKnown RBP12.03□□□□□ -0.48
Ctr9-201ENSMUST00000005749 CrebbpP45481 2441 aa12.03□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Gm7792A0A0J9YU01 481 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Olfr1123A2AT85 323 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Gm3183D3YUJ6 481 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Slc27a6E9Q9W4 619 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Gm3139J3QK78 481 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Gm3106J3QPH3 481 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Gdi1P50396 447 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Slc5a10Q5SWY8 596 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Icam5Q60625 917 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Gdpd5Q640M6 607 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Txndc15Q6P6J9 344 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 UstQ8BUB6 407 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Pggt1bQ8BUY9 377 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Slc25a3Q8VEM8 357 aaKnown RBP12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 2010109A12RikQ9D875 119 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 HemgnQ9ERZ0 503 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Myh10Q61879 1976 aaKnown RBP12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 SpaarA0A1B0GSZ0 75 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 4930402K13RikB1AW18 415 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Lrrc23O35125 340 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 GcatO88986 416 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Rhox5P52651 210 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Ndst2P52850 883 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Cdk7Q03147 346 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Bcl2a1Q07440 172 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Aldh16a1Q571I9 802 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Pabpc5Q8C7D3 381 aaKnown RBP12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Adgrg1Q8K209 687 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Ube2q2Q8K2Z8 378 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Pitrm1Q8K411 1036 aaKnown RBP12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Sh3kbp1Q8R550 709 aaKnown RBP12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Pwp1Q99LL5 501 aaKnown RBP12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Ndrg2Q9QYG0 371 aaKnown RBP12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Abt1Q9QYL7 269 aaKnown RBP12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Katna1Q9WV86 491 aa12.02□□□□□ -0.48
Ctr9-201ENSMUST00000005749 Urb1Q571H0 2274 aaKnown RBP12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Igkv18-36A0A075B5M9 114 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Olfr603L7N1Y4 312 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Dnmt3aO88508 908 aaKnown RBP12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 RcvrnP34057 202 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Cxcr2P35343 359 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Cntn5P68500 1098 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 UtyP79457 1212 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Patl1Q3TC46 770 aaKnown RBP12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Zc3h11aQ6NZF1 792 aaKnown RBP12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Zswim5Q80TC6 1188 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Trim50Q810I2 483 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Pmf1Q9CPV5 202 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Agpat3Q9D517 376 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Chrna6Q9R0W9 494 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Adam18Q9R157 719 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Myh9Q8VDD5 1960 aaKnown RBP12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Tmem265E9Q8G3 109 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Znf683I7HJS4 458 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Elp6Q8BK75 266 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Hus1Q8BQY8 280 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Cfap20Q8BTU1 193 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Hist1h2aaQ8CGP4 129 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Treml1Q8K558 317 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Cd207Q8VBX4 331 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 HnrnprQ8VHM5 632 aaKnown RBP12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 GcshQ91WK5 170 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Tmem98Q91X86 226 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Msh4Q99MT2 958 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 QpctQ9CYK2 362 aa12.02□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Slfn3A0A1L1STQ7 640 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Ssxb6A2BI74 170 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Ssxb8B1AY40 170 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 1700011I03RikE9PYL8 271 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Gm11236J3QMS7 360 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Gm3159K7N760 267 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Klc1O88447 541 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Gm11487Q5RIS0 354 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Bpifb1Q61114 474 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Ddx5Q61656 614 aaKnown RBP12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Nlrp4fQ66X05 959 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Otub1Q7TQI3 271 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Vmn1r188Q8K3N2 308 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Vmn1r18Q8R2C8 299 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Micu1Q8VCX5 477 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Olfr665Q8VG79 316 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Npffr2Q924H0 417 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Armc1Q9D7A8 282 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Snx5Q9D8U8 404 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Slc29a1Q9JIM1 460 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Cntn6Q9JMB8 1028 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 TprF6ZDS4 2431 aaKnown RBP12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 F8Q06194 2319 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Vmn1r2A2AMT6 306 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Gm11239E9Q5Z9 360 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Gm11237F2Z3W5 360 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Gm11238F2Z478 360 aa12.01□□□□□ -0.49
Ctr9-201ENSMUST00000005749 Mkln1O89050 735 aa12.01□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 34.4 ms