RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 GPRC5DQ9NZD1 345 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 ZNF69Q9UC07 566 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 AFDNP55196 1824 aaKnown RBP9.28□□□□□ -0.92
COL12A1-211ENST00000615798 TXNL1O43396 289 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 GMDSO60547 372 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 CYP3A4P08684 503 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 MYL6P60660 151 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 GRB10Q13322 594 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 SV2CQ496J9 727 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 SLC45A4Q5BKX6 768 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 NOMO2Q5JPE7 1267 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 OFCC1Q8IZS5 231 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 FAM124BQ9H5Z6 455 aaPredicted RBP9.28□□□□□ -0.92
COL12A1-211ENST00000615798 PTBP2Q9UKA9 531 aaKnown RBP9.28□□□□□ -0.92
COL12A1-211ENST00000615798 SNRNP200O75643 2136 aaKnown RBP9.28□□□□□ -0.92
COL12A1-211ENST00000615798 GNG14A0A1W2PPG7 69 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 TTC34A8MYJ7 566 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 PTPN11Q06124 597 aaPredicted RBP9.28□□□□□ -0.92
COL12A1-211ENST00000615798 DCAF4L1Q3SXM0 396 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 ILDR1Q86SU0 546 aaPredicted RBP9.28□□□□□ -0.92
COL12A1-211ENST00000615798 THEM5Q8N1Q8 247 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 ZNF366Q8N895 744 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 ZNF398Q8TD17 642 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 BRD9Q9H8M2 597 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 KCNK4Q9NYG8 393 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 PRKAG3Q9UGI9 489 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 PCDHGB7Q9Y5F8 929 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 GSTT2P0CG29 244 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 NR2F6P10588 404 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 IL7P13232 177 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 TPI1P60174 286 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 LIN52Q52LA3 116 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 C6orf52Q5T4I8 152 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 MTFR2Q6P444 385 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 ZNF852Q6ZMS4 543 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.28□□□□□ -0.92
COL12A1-211ENST00000615798 ARCQ7LC44 396 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 MYO1HQ8N1T3 1032 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 SLC25A23Q9BV35 468 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 PCM1Q15154 2024 aa9.28□□□□□ -0.92
COL12A1-211ENST00000615798 COILP38432 576 aaPredicted RBP9.27□□□□□ -0.92
COL12A1-211ENST00000615798 NAGLUP54802 743 aa9.27□□□□□ -0.92
COL12A1-211ENST00000615798 SLC13A2Q13183 592 aa9.27□□□□□ -0.92
COL12A1-211ENST00000615798 CBWD2Q8IUF1 395 aa9.27□□□□□ -0.92
COL12A1-211ENST00000615798 OR2AP1Q8NGE2 309 aa9.27□□□□□ -0.92
COL12A1-211ENST00000615798 ADIPOR1Q96A54 375 aa9.27□□□□□ -0.92
COL12A1-211ENST00000615798 REXO5Q96IC2 774 aaKnown RBP9.27□□□□□ -0.92
COL12A1-211ENST00000615798 PPA2Q9H2U2 334 aa9.27□□□□□ -0.92
COL12A1-211ENST00000615798 ZNF175Q9Y473 711 aa9.27□□□□□ -0.92
COL12A1-211ENST00000615798 AP4B1Q9Y6B7 739 aa9.27□□□□□ -0.92
COL12A1-211ENST00000615798 PIGRP01833 764 aa9.27□□□□□ -0.92
COL12A1-211ENST00000615798 TSHRP16473 764 aa9.27□□□□□ -0.92
COL12A1-211ENST00000615798 CHRNA5P30532 468 aa9.27□□□□□ -0.92
COL12A1-211ENST00000615798 UGT2B10P36537 528 aa9.27□□□□□ -0.92
COL12A1-211ENST00000615798 MAN2A2P49641 1150 aa9.27□□□□□ -0.92
COL12A1-211ENST00000615798 ZNF135P52742 658 aaPredicted RBP9.27□□□□□ -0.92
COL12A1-211ENST00000615798 FAM187BQ17R55 369 aa9.27□□□□□ -0.92
COL12A1-211ENST00000615798 REPS2Q8NFH8 660 aa9.27□□□□□ -0.92
COL12A1-211ENST00000615798 FAM151AQ8WW52 585 aa9.27□□□□□ -0.92
COL12A1-211ENST00000615798 ANGPTL7O43827 346 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 EAPPQ56P03 285 aaPredicted RBP9.27□□□□□ -0.93
COL12A1-211ENST00000615798 PID1Q7Z2X4 250 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 CASKIN2Q8WXE0 1202 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 SYT4Q9H2B2 425 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 NCKIPSDQ9NZQ3 722 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 AKT3Q9Y243 479 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 PIK3C2AO00443 1686 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 STK17BO94768 372 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 CPSF4O95639 269 aaKnown RBP9.27□□□□□ -0.93
COL12A1-211ENST00000615798 TAF6P49848 677 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 AFF3P51826 1226 aaKnown RBP9.27□□□□□ -0.93
COL12A1-211ENST00000615798 TMEM119Q4V9L6 283 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 LDHDQ86WU2 507 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 KLHL6Q8WZ60 621 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 C1GALT1C1Q96EU7 318 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 DNAJC1Q96KC8 554 aaKnown RBP9.27□□□□□ -0.93
COL12A1-211ENST00000615798 C8orf48Q96LL4 319 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 LYARQ9NX58 379 aaKnown RBP9.27□□□□□ -0.93
COL12A1-211ENST00000615798 PDCD5O14737 125 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 BNIP2Q12982 314 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 NKAPLQ5M9Q1 402 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 RNF43Q68DV7 783 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 RASGEF1AQ8N9B8 481 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 KLHL15Q96M94 604 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 AGPAT3Q9NRZ7 376 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 MRC1P22897 1456 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 TEX51A0A1B0GUA7 166 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 ZW10O43264 779 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 RGS9O75916 674 aaPredicted RBP9.27□□□□□ -0.93
COL12A1-211ENST00000615798 ITGA2P17301 1181 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 CYP11B2P19099 503 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 PDK2Q15119 407 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 ABCA11PQ4W5N1 156 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 GALNTL5Q7Z4T8 443 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 C12orf45Q8N5I9 185 aaPredicted RBP9.27□□□□□ -0.93
COL12A1-211ENST00000615798 KIAA1683Q9H0B3 1180 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 GJA3Q9Y6H8 435 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 LOC100509620A0A075B734 347 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 DPYSL4O14531 572 aa9.27□□□□□ -0.93
COL12A1-211ENST00000615798 ZMPSTE24O75844 475 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms