RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 SPO11Q9Y5K1 396 aa12.66□□□□□ -0.38
CSTF1-208ENST00000613138 UNC13CQ8NB66 2214 aa12.66□□□□□ -0.38
CSTF1-208ENST00000613138 CCDC66A2RUB6 948 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 CFAP69A5D8W1 941 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 APOC4-APOC2K7ER74 178 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 AURKAO14965 403 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 AQP9O43315 295 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 APOC2P02655 101 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 NR2C2P49116 596 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 STC1P52823 247 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 GSDMDP57764 484 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 SRP54P61011 504 aaKnown RBP12.65□□□□□ -0.38
CSTF1-208ENST00000613138 HNRNPKP61978 463 aaKnown RBP eCLIP12.65□□□□□ -0.38
CSTF1-208ENST00000613138 YPEL5P62699 121 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 SHC2P98077 582 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 PPARDQ03181 441 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 MTM1Q13496 603 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 ARHGEF7Q14155 803 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 CCDC181Q5TID7 509 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 RAET1GQ6H3X3 334 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 ESRP1Q6NXG1 681 aaKnown RBP12.65□□□□□ -0.38
CSTF1-208ENST00000613138 DOK6Q6PKX4 331 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 KDELC1Q6UW63 502 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 HEATR4Q86WZ0 1026 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 DCP2Q8IU60 420 aaKnown RBP12.65□□□□□ -0.38
CSTF1-208ENST00000613138 HTR3CQ8WXA8 447 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 APOLD1Q96LR9 279 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 GRPEL1Q9HAV7 217 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 LZTFL1Q9NQ48 299 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 KLHL8Q9P2G9 620 aaPredicted RBP12.65□□□□□ -0.38
CSTF1-208ENST00000613138 KLQ9UEF7 1012 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 AMACRQ9UHK6 382 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 MOSPD1Q9UJG1 213 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 APOBEC2Q9Y235 224 aaKnown RBP12.65□□□□□ -0.38
CSTF1-208ENST00000613138 TMEM98Q9Y2Y6 226 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.65□□□□□ -0.38
CSTF1-208ENST00000613138 PLEKHM1Q9Y4G2 1056 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 PCYT1BQ9Y5K3 369 aaPredicted RBP12.65□□□□□ -0.38
CSTF1-208ENST00000613138 USP24Q9UPU5 2620 aa12.65□□□□□ -0.38
CSTF1-208ENST00000613138 EPG5Q9HCE0 2579 aa12.65□□□□□ -0.39
CSTF1-208ENST00000613138 FREM2Q5SZK8 3169 aa12.64□□□□□ -0.39
CSTF1-208ENST00000613138 C1orf232A0A0U1RR37 186 aa12.64□□□□□ -0.39
CSTF1-208ENST00000613138 GOLGA6L6A8MZA4 724 aa12.64□□□□□ -0.39
CSTF1-208ENST00000613138 INPP4BO15327 924 aa12.64□□□□□ -0.39
CSTF1-208ENST00000613138 TRIM23P36406 574 aa12.64□□□□□ -0.39
CSTF1-208ENST00000613138 HK3P52790 923 aa12.64□□□□□ -0.39
CSTF1-208ENST00000613138 EIF3EP60228 445 aaKnown RBP12.64□□□□□ -0.39
CSTF1-208ENST00000613138 PTK2BQ14289 1009 aa12.64□□□□□ -0.39
CSTF1-208ENST00000613138 ZNF648Q5T619 568 aaPredicted RBP12.64□□□□□ -0.39
CSTF1-208ENST00000613138 PID1Q7Z2X4 250 aa12.64□□□□□ -0.39
CSTF1-208ENST00000613138 SLC25A41Q8N5S1 370 aa12.64□□□□□ -0.39
CSTF1-208ENST00000613138 IFT43Q96FT9 208 aa12.64□□□□□ -0.39
CSTF1-208ENST00000613138 HES6Q96HZ4 224 aa12.64□□□□□ -0.39
CSTF1-208ENST00000613138 WDR92Q96MX6 357 aa12.64□□□□□ -0.39
CSTF1-208ENST00000613138 RIOK2Q9BVS4 552 aaKnown RBP12.64□□□□□ -0.39
CSTF1-208ENST00000613138 TMEM168Q9H0V1 697 aa12.64□□□□□ -0.39
CSTF1-208ENST00000613138 WDR26Q9H7D7 661 aa12.64□□□□□ -0.39
CSTF1-208ENST00000613138 CYP4F12Q9HCS2 524 aa12.64□□□□□ -0.39
CSTF1-208ENST00000613138 ARFGAP3Q9NP61 516 aa12.64□□□□□ -0.39
CSTF1-208ENST00000613138 SIRPGQ9P1W8 387 aa12.64□□□□□ -0.39
CSTF1-208ENST00000613138 ST14Q9Y5Y6 855 aa12.64□□□□□ -0.39
CSTF1-208ENST00000613138 DMXL2Q8TDJ6 3036 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 A0A1W2PQ67 120 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 FADS2P1A8MWK0 482 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 ANKRD66B4E2M5 251 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 H3BM21 787 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 YY2O15391 372 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 ARHGAP6O43182 974 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 BUD23O43709 281 aaKnown RBP12.63□□□□□ -0.39
CSTF1-208ENST00000613138 RFPL3O75679 317 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 RASGRP1O95267 797 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 RBP3P10745 1247 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 CKMT2P17540 419 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 CES1P23141 567 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 PSMB4P28070 264 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 PTPN7P35236 360 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 WNT3AP56704 352 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 KIAA1024LP59773 190 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 COPS2P61201 443 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 DAB2P98082 770 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 CDK3Q00526 305 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 CDK18Q07002 472 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 PERM1Q5SV97 790 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 ALS2CLQ60I27 953 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 GUSBP11Q6P575 273 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 PRUNE1Q86TP1 453 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 SLC35F3Q8IY50 421 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 TAB3Q8N5C8 712 aaPredicted RBP12.63□□□□□ -0.39
CSTF1-208ENST00000613138 OR56A4Q8NGH8 313 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 CCDC110Q8TBZ0 833 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 ATG4AQ8WYN0 398 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 GATA6Q92908 595 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 AP2M1Q96CW1 435 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 MRGPRX2Q96LB1 330 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 APOL2Q9BQE5 337 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 MLPHQ9BV36 600 aaPredicted RBP12.63□□□□□ -0.39
CSTF1-208ENST00000613138 SLC13A1Q9BZW2 595 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 NLGN3Q9NZ94 848 aa12.63□□□□□ -0.39
CSTF1-208ENST00000613138 OAS3Q9Y6K5 1087 aaKnown RBP12.63□□□□□ -0.39
CSTF1-208ENST00000613138 CELSR3Q9NYQ7 3312 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms