RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 PRKCGP05129 697 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PIRTP0C851 137 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SLC35E2BP0CK96 405 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TAC1P20366 129 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 DRD4P21917 467 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 RPS3P23396 243 aaKnown RBP eCLIP12.27□□□□□ -0.452e-15■■■□□ 16.4
NEDD8-MDP1-203ENST00000604306 SLC8A1P32418 973 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 HNF1BP35680 557 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ABL2P42684 1182 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PTGER3P43115 390 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 NUMBP49757 651 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SLC12A2P55011 1212 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 XIAPP98170 497 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 HTR4Q13639 388 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ENPP2Q13822 863 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ELAVL3Q14576 367 aaKnown RBP12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 LRRC14Q15048 493 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 GKAP1Q5VSY0 366 aaPredicted RBP12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TTC19Q6DKK2 380 aaPredicted RBP12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CDHR3Q6ZTQ4 885 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 LYSMD3Q7Z3D4 306 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SNX20Q7Z614 316 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 DSG4Q86SJ6 1040 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TAX1BP1Q86VP1 789 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 OTUD6BQ8N6M0 293 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SREK1Q8WXA9 508 aaKnown RBP12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 MSANTD3Q96H12 275 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 OMDQ99983 421 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PLCD4Q9BRC7 762 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 APOL5Q9BWW9 433 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TTYH1Q9H313 450 aaPredicted RBP12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SLC17A7Q9P2U7 560 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 THAP10Q9P2Z0 257 aaPredicted RBP12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SUN2Q9UH99 717 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SLC39A10Q9ULF5 831 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PCDHB1Q9Y5F3 818 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 BRWD1Q9NSI6 2320 aa12.27□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 OTOL1A6NHN0 477 aaPredicted RBP12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 UPK3BL1B0FP48 263 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PRRT4C9JH25 899 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 UPK3BL2E5RIL1 263 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 H0Y858 1186 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 HAUS5O94927 633 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SNUPNO95149 360 aaKnown RBP12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 KLHL2O95198 593 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ESR1P03372 595 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PROCP04070 461 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 APODP05090 189 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 UGT2B4P06133 528 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 BPGMP07738 259 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ITGALP20701 1170 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 FDXRP22570 491 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ITGB7P26010 798 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PMLP29590 882 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 VIPR1P32241 457 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 MC4RP32245 332 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SPAM1P38567 509 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TNFRSF4P43489 277 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 DLX2Q07687 328 aaPredicted RBP12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PEX6Q13608 980 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ITIH4Q14624 930 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 N4BP2L1Q5TBK1 243 aaPredicted RBP12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 HECTD2Q5U5R9 776 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ATG16L1Q676U5 607 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CNSTQ6PJW8 725 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PARM1Q6UWI2 310 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CPLX4Q7Z7G2 160 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 CMC1Q7Z7K0 106 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PAF1Q8N7H5 531 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 OR6K2Q8NGY2 324 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TTC8Q8TAM2 541 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 GDAP1Q8TB36 358 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ZNF473Q8WTR7 871 aaKnown RBP12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 OR8D1Q8WZ84 308 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 LPGAT1Q92604 370 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 DNASE1L2Q92874 299 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 FGF14Q92915 247 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ULK4Q96C45 1275 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 PPP1R16AQ96I34 528 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ELMO2Q96JJ3 720 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 ZFYVE19Q96K21 471 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 UBXN10Q96LJ8 280 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 C1QTNF1Q9BXJ1 281 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SLC13A1Q9BZW2 595 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 BRD9Q9H8M2 597 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 FBRSQ9HAH7 460 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 FBXO6Q9NRD1 293 aaPredicted RBP12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SMOXQ9NWM0 555 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 MARCH4Q9P2E8 410 aaPredicted RBP12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 FKBPLQ9UIM3 349 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 VWA7Q9Y334 891 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 SLC30A1Q9Y6M5 507 aa12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 RANBP2P49792 3224 aaKnown RBP12.26□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TNRC18O15417 2968 aaPredicted RBP12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 NPIPB15A6NHN6 443 aaPredicted RBP12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TTC34A8MYJ7 566 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TCP11X1B4DZS4 312 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 H3BMM5 538 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 TRIM24O15164 1050 aa12.25□□□□□ -0.45
NEDD8-MDP1-203ENST00000604306 EDF1O60869 148 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms