RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 CNOT10Q9H9A5 744 aaKnown RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 RC3H2Q9HBD1 1191 aaKnown RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 MOV10Q9HCE1 1003 aaKnown RBP5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 TMEM140Q9NV12 185 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 CFAP97Q9P2B7 532 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 B4GALT6Q9UBX8 382 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 AP4E1Q9UPM8 1137 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 TEX264Q9Y6I9 313 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 PMF1-BGLAPU3KQ54 211 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 FAM205AQ6ZU69 1335 aa5.04□□□□□ -1.6
SPTBN1-206ENST00000602898 A0A0A6YYC8 382 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 C1orf232A0A0U1RR37 186 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 SH3D21A4FU49 640 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 NPIPB15A6NHN6 443 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 ZNF233A6NK53 670 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 H3BUI4 141 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 I3L1I5 382 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 AQP9O43315 295 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 SPRY1O43609 319 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 RSL1D1O76021 490 aaKnown RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 PCDH8O95206 1070 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 PLEKHA8P1O95397 391 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 CST3P01034 146 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 TFRCP02786 760 aaKnown RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 HMGN1P05114 100 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 TFPTP0C1Z6 253 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 UQCRFS1P1P0C7P4 283 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 OCM2P0CE71 109 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 OCMP0CE72 109 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 ERVK-10P10266 1014 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 KRT5P13647 590 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 NUDT1P36639 197 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 IGHMBP2P38935 993 aaKnown RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 PBX3P40426 434 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 GNG2P59768 71 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 ATP6V0D1P61421 351 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 HTRA4P83105 476 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 SMAD3P84022 425 aaKnown RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 CYP4F3Q08477 520 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 EPS8Q12929 822 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 RESTQ13127 1097 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 SNX17Q15036 470 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 SEC23BQ15437 767 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 UGP2Q16851 508 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 CCDC142Q17RM4 750 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 BTBD16Q32M84 506 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 TWISTNBQ3B726 338 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 ZC2HC1CQ53FD0 456 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 TAF1BQ53T94 588 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 RTP2Q5QGT7 225 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 UBXN11Q5T124 520 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 CCNJQ5T5M9 372 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 RHOUQ7L0Q8 258 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 MIGA2Q7L4E1 593 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 DEFB132Q7Z7B7 95 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 SCN4BQ8IWT1 228 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 SLC35F6Q8N357 371 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 ZCCHC7Q8N3Z6 543 aaKnown RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 MARCH10Q8NA82 808 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 FANCBQ8NB91 859 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 CHST14Q8NCH0 376 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 ENKURQ8TC29 256 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 CPT1CQ8TCG5 803 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 SLC35A4Q96G79 324 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 SLC6A18Q96N87 628 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 MMP19Q99542 508 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 MEIS3Q99687 375 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 OLFM1Q99784 485 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 SEMA3CQ99985 751 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 SELENOSQ9BQE4 189 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 PITHD1Q9GZP4 211 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 METTL7AQ9H8H3 244 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 SACM1LQ9NTJ5 587 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 PKD2L2Q9NZM6 624 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 COL20A1Q9P218 1284 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 ATP6V1HQ9UI12 483 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 GAB2Q9UQC2 676 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 AP3M1Q9Y2T2 418 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 PCDHGC4Q9Y5F7 938 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 COL3A1P02461 1466 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 SLIT3O75094 1523 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 C2orf92A0A1B0GVN3 265 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 HEATR9A2RTY3 570 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 TRIM77I1YAP6 450 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 SLC9A3R1O14745 358 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 BET1O15155 118 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 POLR1CO15160 346 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 RAD51BO15315 384 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 RNMTO43148 476 aaKnown RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 NDUFS6O75380 124 aaKnown RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 NME6O75414 186 aaPredicted RBP5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 UBOX5O94941 541 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 ATE1O95260 518 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 KLKB1P03952 638 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 PFKMP08237 780 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 EPORP19235 508 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 FGFR3P22607 806 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 PCSK1P29120 753 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 PKLRP30613 574 aa5.03□□□□□ -1.6
SPTBN1-206ENST00000602898 CORO1AP31146 461 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms