RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 NDST4Q9H3R1 872 aa3.96□□□□□ -1.78
COPS3-217ENST00000583160 PLEKHA5Q9HAU0 1116 aa3.96□□□□□ -1.78
COPS3-217ENST00000583160 TMEM160Q9NX00 188 aa3.96□□□□□ -1.78
COPS3-217ENST00000583160 SLC25A10Q9UBX3 287 aaPredicted RBP3.96□□□□□ -1.78
COPS3-217ENST00000583160 TEX13CA0A0J9YWL9 993 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 GOLGA6L9A6NEM1 432 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 IFNL4K9M1U5 179 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 SEC14L5O43304 696 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 COX7A2P14406 83 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 ITGA2P17301 1181 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 GNL1P36915 607 aaPredicted RBP3.95□□□□□ -1.78
COPS3-217ENST00000583160 USP8P40818 1118 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 SORDQ00796 357 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 PDE1BQ01064 536 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 TAF12Q16514 161 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 GPATCH4Q5T3I0 446 aaKnown RBP3.95□□□□□ -1.78
COPS3-217ENST00000583160 PLA2G4FQ68DD2 849 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 TRNP1Q6NT89 227 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 LRRTM4Q86VH4 590 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 RNF113BQ8IZP6 322 aaKnown RBP3.95□□□□□ -1.78
COPS3-217ENST00000583160 C1orf87Q8N0U7 546 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 ANKRD42Q8N9B4 389 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 ZCCHC10Q8TBK6 192 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 WBP2Q969T9 261 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 ZBTB10Q96DT7 871 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 MAELQ96JY0 434 aaKnown RBP3.95□□□□□ -1.78
COPS3-217ENST00000583160 KLHL15Q96M94 604 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 MPHOSPH8Q99549 860 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 CMKLR1Q99788 373 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 SH3GL2Q99962 352 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 H2AFJQ9BTM1 129 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 TKTL2Q9H0I9 626 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 PLEKHA4Q9H4M7 779 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 MMP25Q9NPA2 562 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 HINT3Q9NQE9 182 aaKnown RBP3.95□□□□□ -1.78
COPS3-217ENST00000583160 TAAR2Q9P1P5 351 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.95□□□□□ -1.78
COPS3-217ENST00000583160 TTC7AQ9ULT0 858 aaPredicted RBP3.95□□□□□ -1.78
COPS3-217ENST00000583160 TCF19Q9Y242 345 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 AMDHD2Q9Y303 409 aa3.95□□□□□ -1.78
COPS3-217ENST00000583160 FAM72CH0Y354 149 aa3.94□□□□□ -1.78
COPS3-217ENST00000583160 TAF4O00268 1085 aa3.94□□□□□ -1.78
COPS3-217ENST00000583160 AMBPP02760 352 aa3.94□□□□□ -1.78
COPS3-217ENST00000583160 BDKRB2P30411 391 aa3.94□□□□□ -1.78
COPS3-217ENST00000583160 TIMP3P35625 211 aa3.94□□□□□ -1.78
COPS3-217ENST00000583160 CDKN1AP38936 164 aa3.94□□□□□ -1.78
COPS3-217ENST00000583160 LINC01547P58512 204 aaPredicted RBP3.94□□□□□ -1.78
COPS3-217ENST00000583160 PITX1P78337 314 aaPredicted RBP3.94□□□□□ -1.78
COPS3-217ENST00000583160 NAE1Q13564 534 aa3.94□□□□□ -1.78
COPS3-217ENST00000583160 CAMK1Q14012 370 aa3.94□□□□□ -1.78
COPS3-217ENST00000583160 FAM72AQ5TYM5 149 aa3.94□□□□□ -1.78
COPS3-217ENST00000583160 HIST2H2BCQ6DN03 193 aa3.94□□□□□ -1.78
COPS3-217ENST00000583160 HIST2H2BDQ6DRA6 164 aa3.94□□□□□ -1.78
COPS3-217ENST00000583160 FAM72DQ6L9T8 149 aa3.94□□□□□ -1.78
COPS3-217ENST00000583160 NFE4Q86UQ8 179 aa3.94□□□□□ -1.78
COPS3-217ENST00000583160 FAM72BQ86X60 149 aa3.94□□□□□ -1.78
COPS3-217ENST00000583160 EPHX4Q8IUS5 362 aa3.94□□□□□ -1.78
COPS3-217ENST00000583160 OR2AK2Q8NG84 335 aa3.94□□□□□ -1.78
COPS3-217ENST00000583160 MTERF1Q99551 399 aaKnown RBP3.94□□□□□ -1.78
COPS3-217ENST00000583160 FUZQ9BT04 418 aa3.94□□□□□ -1.78
COPS3-217ENST00000583160 GLIS2Q9BZE0 524 aaPredicted RBP3.94□□□□□ -1.78
COPS3-217ENST00000583160 PPP1R3EQ9H7J1 279 aa3.94□□□□□ -1.78
COPS3-217ENST00000583160 SCRT2Q9NQ03 307 aa3.94□□□□□ -1.78
COPS3-217ENST00000583160 A4GNTQ9UNA3 340 aa3.94□□□□□ -1.78
COPS3-217ENST00000583160 LOXL2Q9Y4K0 774 aa3.94□□□□□ -1.78
COPS3-217ENST00000583160 CC2D2AQ9P2K1 1620 aa3.94□□□□□ -1.78
COPS3-217ENST00000583160 EIF4G1Q04637 1599 aaKnown RBP3.93□□□□□ -1.78
COPS3-217ENST00000583160 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.93□□□□□ -1.78
COPS3-217ENST00000583160 LILRA5A6NI73 299 aa3.93□□□□□ -1.78
COPS3-217ENST00000583160 TNPO2O14787 897 aaKnown RBP3.93□□□□□ -1.78
COPS3-217ENST00000583160 HSD3B1P14060 373 aa3.93□□□□□ -1.78
COPS3-217ENST00000583160 MYOD1P15172 320 aa3.93□□□□□ -1.78
COPS3-217ENST00000583160 CD53P19397 219 aa3.93□□□□□ -1.78
COPS3-217ENST00000583160 CNTFP26441 200 aa3.93□□□□□ -1.78
COPS3-217ENST00000583160 CORO1AP31146 461 aaKnown RBP3.93□□□□□ -1.78
COPS3-217ENST00000583160 GABRB2P47870 512 aa3.93□□□□□ -1.78
COPS3-217ENST00000583160 GNAQP50148 359 aa3.93□□□□□ -1.78
COPS3-217ENST00000583160 RPP30P78346 268 aaKnown RBP3.93□□□□□ -1.78
COPS3-217ENST00000583160 FOXD4Q12950 439 aaPredicted RBP3.93□□□□□ -1.78
COPS3-217ENST00000583160 CCDC6Q16204 474 aa3.93□□□□□ -1.78
COPS3-217ENST00000583160 SLC9B1Q4ZJI4 515 aa3.93□□□□□ -1.78
COPS3-217ENST00000583160 NAA35Q5VZE5 725 aa3.93□□□□□ -1.78
COPS3-217ENST00000583160 GGNBP1Q5YKI7 109 aa3.93□□□□□ -1.78
COPS3-217ENST00000583160 PLEKHA7Q6IQ23 1121 aa3.93□□□□□ -1.78
COPS3-217ENST00000583160 SLC24A4Q8NFF2 622 aa3.93□□□□□ -1.78
COPS3-217ENST00000583160 GCC1Q96CN9 775 aa3.93□□□□□ -1.78
COPS3-217ENST00000583160 PABPC5Q96DU9 382 aaKnown RBP3.93□□□□□ -1.78
COPS3-217ENST00000583160 ALG14Q96F25 216 aa3.93□□□□□ -1.78
COPS3-217ENST00000583160 APOPT1Q96IL0 206 aa3.93□□□□□ -1.78
COPS3-217ENST00000583160 SLC41A2Q96JW4 573 aa3.93□□□□□ -1.78
COPS3-217ENST00000583160 FAM110AQ9BQ89 295 aa3.93□□□□□ -1.78
COPS3-217ENST00000583160 ERVK-11Q9UQG0 969 aa3.93□□□□□ -1.78
COPS3-217ENST00000583160 SCINQ9Y6U3 715 aa3.93□□□□□ -1.78
COPS3-217ENST00000583160 IFRD1O00458 451 aaPredicted RBP3.92□□□□□ -1.78
COPS3-217ENST00000583160 ZG16O60844 167 aa3.92□□□□□ -1.78
COPS3-217ENST00000583160 FGF5P12034 268 aa3.92□□□□□ -1.78
COPS3-217ENST00000583160 KRT10P13645 584 aa3.92□□□□□ -1.78
COPS3-217ENST00000583160 GM2AP17900 193 aa3.92□□□□□ -1.78
COPS3-217ENST00000583160 GGT5P36269 586 aa3.92□□□□□ -1.78
COPS3-217ENST00000583160 ISL1P61371 349 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms