RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 MRPL47Q9HD33 250 aaKnown RBP17.88■□□□□ 0.45
MKS1-209ENST00000580127 HAUS2Q9NVX0 235 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 GEMIN8Q9NWZ8 242 aaKnown RBP17.88■□□□□ 0.45
MKS1-209ENST00000580127 FOXJ2Q9P0K8 574 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 PCDHGC4Q9Y5F7 938 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 PCDHGA3Q9Y5H0 932 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 SCINQ9Y6U3 715 aa17.88■□□□□ 0.45
MKS1-209ENST00000580127 IGHV5-10-1A0A0J9YXX1 117 aa17.87■□□□□ 0.45
MKS1-209ENST00000580127 PYCARD-AS1I3L0S3 204 aa17.87■□□□□ 0.45
MKS1-209ENST00000580127 SUV39H1O43463 412 aa17.87■□□□□ 0.45
MKS1-209ENST00000580127 IVLP07476 585 aa17.87■□□□□ 0.45
MKS1-209ENST00000580127 GZMAP12544 262 aa17.87■□□□□ 0.45
MKS1-209ENST00000580127 CD1CP29017 333 aa17.87■□□□□ 0.45
MKS1-209ENST00000580127 MIPP30301 263 aa17.87■□□□□ 0.45
MKS1-209ENST00000580127 MAN1A1P33908 653 aa17.87■□□□□ 0.45
MKS1-209ENST00000580127 LIMK2P53671 638 aa17.87■□□□□ 0.45
MKS1-209ENST00000580127 MAZP56270 477 aaKnown RBP17.87■□□□□ 0.45
MKS1-209ENST00000580127 NR1D2Q14995 579 aa17.87■□□□□ 0.45
MKS1-209ENST00000580127 C16orf72Q14CZ0 275 aa17.87■□□□□ 0.45
MKS1-209ENST00000580127 CA9Q16790 459 aa17.87■□□□□ 0.45
MKS1-209ENST00000580127 RAET1GQ6H3X3 334 aa17.87■□□□□ 0.45
MKS1-209ENST00000580127 SLC30A9Q6PML9 568 aa17.87■□□□□ 0.45
MKS1-209ENST00000580127 TMCO3Q6UWJ1 677 aa17.87■□□□□ 0.45
MKS1-209ENST00000580127 IRF2BP2Q7Z5L9 587 aa17.87■□□□□ 0.45
MKS1-209ENST00000580127 SCRN2Q96FV2 425 aa17.87■□□□□ 0.45
MKS1-209ENST00000580127 AHCYL2Q96HN2 611 aaKnown RBP17.87■□□□□ 0.45
MKS1-209ENST00000580127 FRMD8Q9BZ67 464 aaPredicted RBP17.87■□□□□ 0.45
MKS1-209ENST00000580127 ZMYND15Q9H091 742 aa17.87■□□□□ 0.45
MKS1-209ENST00000580127 SLC25A18Q9H1K4 315 aa17.87■□□□□ 0.45
MKS1-209ENST00000580127 SLC39A1Q9NY26 324 aa17.87■□□□□ 0.45
MKS1-209ENST00000580127 CWC15Q9P013 229 aaKnown RBP17.87■□□□□ 0.45
MKS1-209ENST00000580127 SUFUQ9UMX1 484 aa17.87■□□□□ 0.45
MKS1-209ENST00000580127 FTLP02792 175 aaPredicted RBP17.86■□□□□ 0.45
MKS1-209ENST00000580127 CCL4P13236 92 aa17.86■□□□□ 0.45
MKS1-209ENST00000580127 GPR1P46091 355 aa17.86■□□□□ 0.45
MKS1-209ENST00000580127 GPLD1P80108 840 aa17.86■□□□□ 0.45
MKS1-209ENST00000580127 CDK3Q00526 305 aa17.86■□□□□ 0.45
MKS1-209ENST00000580127 CTBSQ01459 385 aa17.86■□□□□ 0.45
MKS1-209ENST00000580127 CNGA3Q16281 694 aa17.86■□□□□ 0.45
MKS1-209ENST00000580127 DCAF12Q5T6F0 453 aa17.86■□□□□ 0.45
MKS1-209ENST00000580127 ARMC12Q5T9G4 340 aa17.86■□□□□ 0.45
MKS1-209ENST00000580127 MARC1Q5VT66 337 aa17.86■□□□□ 0.45
MKS1-209ENST00000580127 BORAQ6PGQ7 559 aa17.86■□□□□ 0.45
MKS1-209ENST00000580127 NRROSQ86YC3 692 aa17.86■□□□□ 0.45
MKS1-209ENST00000580127 LRRC49Q8IUZ0 686 aa17.86■□□□□ 0.45
MKS1-209ENST00000580127 DTD2Q96FN9 168 aa17.86■□□□□ 0.45
MKS1-209ENST00000580127 CCDC74BQ96LY2 380 aa17.86■□□□□ 0.45
MKS1-209ENST00000580127 DDA1Q9BW61 102 aa17.86■□□□□ 0.45
MKS1-209ENST00000580127 KCNK4Q9NYG8 393 aa17.86■□□□□ 0.45
MKS1-209ENST00000580127 MYBL1P10243 752 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 FGF3P11487 239 aaPredicted RBP17.85■□□□□ 0.45
MKS1-209ENST00000580127 GM2AP17900 193 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 ITGB6P18564 788 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 CES1P23141 567 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 SERPINB6P35237 376 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 PCK1P35558 622 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 ADCY8P40145 1251 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 ETV3P41162 512 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 ACTR1BP42025 376 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 CDH6P55285 790 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 RAB15P59190 212 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 ACTR1AP61163 376 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 DPTQ07507 201 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 SRSF6Q13247 344 aaKnown RBP17.85■□□□□ 0.45
MKS1-209ENST00000580127 DPYSQ14117 519 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 STX1AQ16623 288 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 ZNF574Q6ZN55 896 aaPredicted RBP17.85■□□□□ 0.45
MKS1-209ENST00000580127 ARHGAP36Q6ZRI8 547 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 Q6ZVL8 140 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 TMPRSS9Q7Z410 1059 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 SFTPA2Q8IWL1 248 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 CBARPQ8N350 705 aaPredicted RBP17.85■□□□□ 0.45
MKS1-209ENST00000580127 NPWQ8N729 165 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 RCBTB1Q8NDN9 531 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 OR10G6Q8NH81 332 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 NKD1Q969G9 470 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 KIAA1143Q96AT1 154 aaPredicted RBP17.85■□□□□ 0.45
MKS1-209ENST00000580127 CATSPER2Q96P56 530 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 TEFMQ96QE5 360 aaKnown RBP17.85■□□□□ 0.45
MKS1-209ENST00000580127 NUDT22Q9BRQ3 303 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 EFHD1Q9BUP0 239 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 NAT10Q9H0A0 1025 aaKnown RBP17.85■□□□□ 0.45
MKS1-209ENST00000580127 NOD2Q9HC29 1040 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 CNOT8Q9UFF9 292 aaKnown RBP17.85■□□□□ 0.45
MKS1-209ENST00000580127 SLC17A4Q9Y2C5 497 aa17.85■□□□□ 0.45
MKS1-209ENST00000580127 TERTO14746 1132 aaKnown RBP17.84■□□□□ 0.45
MKS1-209ENST00000580127 AK4P27144 223 aaPredicted RBP17.84■□□□□ 0.45
MKS1-209ENST00000580127 MMP13P45452 471 aa17.84■□□□□ 0.45
MKS1-209ENST00000580127 CCR10P46092 362 aa17.84■□□□□ 0.45
MKS1-209ENST00000580127 LRP8Q14114 963 aa17.84■□□□□ 0.45
MKS1-209ENST00000580127 ASIC2Q16515 512 aa17.84■□□□□ 0.45
MKS1-209ENST00000580127 FILIP1LQ4L180 1135 aa17.84■□□□□ 0.45
MKS1-209ENST00000580127 TMEM71Q6P5X7 295 aa17.84■□□□□ 0.45
MKS1-209ENST00000580127 HSD11B1LQ7Z5J1 315 aa17.84■□□□□ 0.45
MKS1-209ENST00000580127 NLRP8Q86W28 1048 aa17.84■□□□□ 0.45
MKS1-209ENST00000580127 ATPAF2Q8N5M1 289 aa17.84■□□□□ 0.45
MKS1-209ENST00000580127 ARFGAP1Q8N6T3 406 aa17.84■□□□□ 0.45
MKS1-209ENST00000580127 JPH3Q8WXH2 748 aaPredicted RBP17.84■□□□□ 0.45
MKS1-209ENST00000580127 ART4Q93070 314 aa17.84■□□□□ 0.45
MKS1-209ENST00000580127 SH3KBP1Q96B97 665 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms