RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 GOLGA6L7A0A1B0GV03 622 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 A0A1B0GVM2 712 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 TCAF2A6NFQ2 919 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 F5H423 210 aaPredicted RBP10.23□□□□□ -0.77
SS18-210ENST00000578700 POC1B-GALNT4F8VUJ3 575 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 ATXN7O15265 892 aaPredicted RBP10.23□□□□□ -0.77
SS18-210ENST00000578700 C1QL1O75973 258 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 SUN1O94901 812 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 POLBP06746 335 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 RHOCP08134 193 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 CD27P26842 260 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 HNF1BP35680 557 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 NPY2RP49146 381 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 MAGOHP61326 146 aaKnown RBP10.23□□□□□ -0.77
SS18-210ENST00000578700 RPS14P62263 151 aaKnown RBP10.23□□□□□ -0.77
SS18-210ENST00000578700 PPP2R2AP63151 447 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 IL10RBQ08334 325 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 ITKQ08881 620 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 ZBTB17Q13105 803 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 TARDBPQ13148 414 aaKnown RBP eCLIP10.23□□□□□ -0.772e-8■■□□□ 13.7
SS18-210ENST00000578700 FASTKD3Q14CZ7 662 aaKnown RBP10.23□□□□□ -0.77
SS18-210ENST00000578700 EIF4HQ15056 248 aaKnown RBP10.23□□□□□ -0.77
SS18-210ENST00000578700 C5orf22Q49AR2 442 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 TMCO4Q5TGY1 634 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 TDRPQ86YL5 185 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 ZNF683Q8IZ20 524 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 SH2D3CQ8N5H7 860 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 EID2Q8N6I1 236 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 HJURPQ8NCD3 748 aaPredicted RBP10.23□□□□□ -0.77
SS18-210ENST00000578700 FBF1Q8TES7 1133 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 CDKL2Q92772 493 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 NXPE2Q96DL1 559 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 STAMBPL1Q96FJ0 436 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 ZNF599Q96NL3 588 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 FCRL3Q96P31 734 aaPredicted RBP10.23□□□□□ -0.77
SS18-210ENST00000578700 FCRL5Q96RD9 977 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 IL12RB2Q99665 862 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 EBNA1BP2Q99848 306 aaKnown RBP10.23□□□□□ -0.77
SS18-210ENST00000578700 FSD1LQ9BXM9 530 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 ACE2Q9BYF1 805 aaPredicted RBP10.23□□□□□ -0.77
SS18-210ENST00000578700 PCED1AQ9H1Q7 454 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 PRORYQ9H606 182 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 ACSS3Q9H6R3 686 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 GLOD4Q9HC38 313 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 SENP1Q9P0U3 644 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 PSMC3IPQ9P2W1 217 aaPredicted RBP10.23□□□□□ -0.77
SS18-210ENST00000578700 NCKAP1Q9Y2A7 1128 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 TEX264Q9Y6I9 313 aa10.23□□□□□ -0.77
SS18-210ENST00000578700 A0A1B0GTQ1 180 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 PCDHGA12O60330 932 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 AVILO75366 819 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 CNTN5O94779 1100 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 INHBAP08476 426 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 PLA2G2AP14555 144 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 PGAM1P18669 254 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 KRT15P19012 456 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 CTSKP43235 329 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 OXCT1P55809 520 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 SESN2P58004 480 aaPredicted RBP10.22□□□□□ -0.77
SS18-210ENST00000578700 GNA12Q03113 381 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 CDH17Q12864 832 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 SERINC3Q13530 473 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 CAMK2GQ13555 558 aaPredicted RBP10.22□□□□□ -0.77
SS18-210ENST00000578700 ZNF235Q14590 738 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 RASA2Q15283 850 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 TMED2Q15363 201 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 MSS51Q4VC12 460 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 MPPE1Q53F39 396 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 ALFQ53S48 1182 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 NADSYN1Q6IA69 706 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 RFWD3Q6PCD5 774 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 SETD3Q86TU7 594 aaPredicted RBP10.22□□□□□ -0.77
SS18-210ENST00000578700 CAND1Q86VP6 1230 aaKnown RBP10.22□□□□□ -0.77
SS18-210ENST00000578700 TP53INP2Q8IXH6 220 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 GSDMBQ8TAX9 411 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 MAML1Q92585 1016 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 ARHGEF2Q92974 986 aaKnown RBP10.22□□□□□ -0.77
SS18-210ENST00000578700 TLCD1Q96CP7 247 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 TMA16Q96EY4 203 aaKnown RBP10.22□□□□□ -0.77
SS18-210ENST00000578700 HMCESQ96FZ2 354 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 NAF1Q96HR8 494 aaKnown RBP10.22□□□□□ -0.77
SS18-210ENST00000578700 SLC6A18Q96N87 628 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 SELENOSQ9BQE4 189 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 SPON2Q9BUD6 331 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 CAPS2Q9BXY5 557 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 SLC2A11Q9BYW1 496 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 MTG2Q9H4K7 406 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 PRSS16Q9NQE7 514 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 AASDHPPTQ9NRN7 309 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 ABCB8Q9NUT2 735 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 PSD3Q9NYI0 1048 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 LGALS13Q9UHV8 139 aa10.22□□□□□ -0.77
SS18-210ENST00000578700 MUC22E2RYF6 1773 aaPredicted RBP10.21□□□□□ -0.77
SS18-210ENST00000578700 COL5A1P20908 1838 aaPredicted RBP10.21□□□□□ -0.77
SS18-210ENST00000578700 IQANK1A0A1B0GTG1 560 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 ILVBLA1L0T0 632 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 TK2O00142 265 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 DFNA5O60443 496 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 BANF1O75531 89 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 RFPL3O75679 317 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms