RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 AP2A1O95782 977 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 HLA-DQB2P05538 268 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 MLNP12872 115 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 CD38P28907 300 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 HNF1BP35680 557 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 EIF2S3P41091 472 aaKnown RBP11.84□□□□□ -0.51
LDLR-212ENST00000560467 NUMBP49757 651 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 SERPINH1P50454 418 aaKnown RBP11.84□□□□□ -0.51
LDLR-212ENST00000560467 AP1S1P61966 158 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 PPP2CBP62714 309 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 PPP2CAP67775 309 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 DHX9Q08211 1270 aaKnown RBP11.84□□□□□ -0.51
LDLR-212ENST00000560467 ARTNQ5T4W7 220 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 FAXCQ5TGI0 409 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 LINGO4Q6UY18 593 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 HDXQ7Z353 690 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 CCNJLQ8IV13 435 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 PALM2Q8IXS6 379 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 AADATQ8N5Z0 425 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 SLC39A7Q92504 469 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 CPT1BQ92523 772 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 ISG20Q96AZ6 181 aaKnown RBP11.84□□□□□ -0.51
LDLR-212ENST00000560467 SERAC1Q96JX3 654 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 GDAP1L1Q96MZ0 367 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 TTC25Q96NG3 672 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 OMDQ99983 421 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 SEMA3CQ99985 751 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 CCDC77Q9BR77 488 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 ADGRE3Q9BY15 652 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 PRORYQ9H606 182 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 PDFQ9HBH1 243 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 GRHL1Q9NZI5 618 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 SCML1Q9UN30 329 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 ERVW-1Q9UQF0 538 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 AK5Q9Y6K8 562 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 CFAP46Q8IYW2 2715 aa11.84□□□□□ -0.51
LDLR-212ENST00000560467 SDR42E2A6NKP2 422 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 ATXN7O15265 892 aaPredicted RBP11.83□□□□□ -0.52
LDLR-212ENST00000560467 INSIG1O15503 277 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 PMPCBO75439 489 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 ZMPSTE24O75844 475 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 POP4O95707 220 aaKnown RBP11.83□□□□□ -0.52
LDLR-212ENST00000560467 IVDP26440 423 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 SLC8A1P32418 973 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 PHBP35232 272 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 CD86P42081 329 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 MAGEA6P43360 314 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 NPY2RP49146 381 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 STK19P49842 368 aaPredicted RBP11.83□□□□□ -0.52
LDLR-212ENST00000560467 CCR5P51681 352 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 METAP1P53582 386 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 ADPRHP54922 357 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 NXPH1P58417 271 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 ARF5P84085 180 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 C19orf57Q0VDD7 668 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 BNIP3Q12983 259 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 KCNJ11Q14654 390 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 CASC4Q6P4E1 433 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 LRRC8BQ6P9F7 803 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 FBXL19Q6PCT2 694 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 TRMT10CQ7L0Y3 403 aaKnown RBP11.83□□□□□ -0.52
LDLR-212ENST00000560467 STK40Q8N2I9 435 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 PCDH20Q8N6Y1 951 aaKnown RBP11.83□□□□□ -0.52
LDLR-212ENST00000560467 CNTD1Q8N815 330 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 NAT8LQ8N9F0 302 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 KDM1BQ8NB78 822 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 IPMKQ8NFU5 416 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 OR52K2Q8NGK3 314 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 OR14C36Q8NHC7 312 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 PYROXD1Q8WU10 500 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 CAVIN3Q969G5 261 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 SKA1Q96BD8 255 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 LRRC39Q96DD0 335 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 ALG14Q96F25 216 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 IMP4Q96G21 291 aaKnown RBP11.83□□□□□ -0.52
LDLR-212ENST00000560467 NUDCD1Q96RS6 583 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 RUFY1Q96T51 708 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 FAM129BQ96TA1 746 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 NAT9Q9BTE0 207 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 PHACTR1Q9C0D0 580 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 ATP13A3Q9H7F0 1226 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 SLCO3A1Q9UIG8 710 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 FZD4Q9ULV1 537 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 HS3ST2Q9Y278 367 aa11.83□□□□□ -0.52
LDLR-212ENST00000560467 EDDM13A0A1B0GTR0 161 aa11.82□□□□□ -0.52
LDLR-212ENST00000560467 A0A1W2PQ67 120 aa11.82□□□□□ -0.52
LDLR-212ENST00000560467 F5H423 210 aaPredicted RBP11.82□□□□□ -0.52
LDLR-212ENST00000560467 TLR4O00206 839 aa11.82□□□□□ -0.52
LDLR-212ENST00000560467 YKT6O15498 198 aa11.82□□□□□ -0.52
LDLR-212ENST00000560467 PEX11BO96011 259 aa11.82□□□□□ -0.52
LDLR-212ENST00000560467 CPP00450 1065 aa11.82□□□□□ -0.52
LDLR-212ENST00000560467 EPOP01588 193 aa11.82□□□□□ -0.52
LDLR-212ENST00000560467 C1SP09871 688 aa11.82□□□□□ -0.52
LDLR-212ENST00000560467 GLDCP23378 1020 aa11.82□□□□□ -0.52
LDLR-212ENST00000560467 SERPINA4P29622 427 aa11.82□□□□□ -0.52
LDLR-212ENST00000560467 CSNK1DP48730 415 aa11.82□□□□□ -0.52
LDLR-212ENST00000560467 ARRB1P49407 418 aaPredicted RBP11.82□□□□□ -0.52
LDLR-212ENST00000560467 VASPP50552 380 aaPredicted RBP11.82□□□□□ -0.52
LDLR-212ENST00000560467 PMS2P54278 862 aa11.82□□□□□ -0.52
LDLR-212ENST00000560467 EPHB1P54762 984 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms