RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 TPP1O14773 563 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 SPINT1O43278 529 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 SUV39H1O43463 412 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 SMAD6O43541 496 aaKnown RBP20.65■□□□□ 0.9
PSEN1-225ENST00000560005 CD48P09326 243 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 FAM87AP0C7U9 286 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 ITGB6P18564 788 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 IL4RP24394 825 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 PTGIRP43119 386 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 RPIAP49247 311 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 VSNL1P62760 191 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 KIAA1161Q6NSJ0 714 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 XKR5Q6UX68 686 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 SLC35F3Q8IY50 421 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 BBOF1Q8ND07 529 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 KCTD15Q96SI1 283 aaPredicted RBP20.65■□□□□ 0.9
PSEN1-225ENST00000560005 CCDC3Q9BQI4 270 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 HERPUD2Q9BSE4 406 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 BOCQ9BWV1 1114 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 TKTL2Q9H0I9 626 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 TNKS2Q9H2K2 1166 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 GPATCH2LQ9NWQ4 482 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 DONSONQ9NYP3 566 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 IL36AQ9UHA7 158 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 VPS51Q9UID3 782 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 ZNF148Q9UQR1 794 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 TBC1D30Q9Y2I9 924 aa20.65■□□□□ 0.9
PSEN1-225ENST00000560005 CFAP69A5D8W1 941 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 BHMG1C9JSJ3 638 aaPredicted RBP20.64■□□□□ 0.89
PSEN1-225ENST00000560005 EEF2KO00418 725 aaKnown RBP20.64■□□□□ 0.89
PSEN1-225ENST00000560005 PLD2O14939 933 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 DAPK3O43293 454 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 NOBOXO60393 691 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 CLDN11O75508 207 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 ITGB2P05107 769 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 SLC5A2P31639 672 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 STIP1P31948 543 aaKnown RBP20.64■□□□□ 0.89
PSEN1-225ENST00000560005 NEK3P51956 506 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 XRCC4Q13426 336 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 SNX1Q13596 522 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 CA9Q16790 459 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 TTC27Q6P3X3 843 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 LINGO4Q6UY18 593 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 ZNF574Q6ZN55 896 aaPredicted RBP20.64■□□□□ 0.89
PSEN1-225ENST00000560005 GSTA5Q7RTV2 222 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 C14orf80Q86SX3 495 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 RBFAQ8N0V3 343 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 CCDC89Q8N998 374 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 WDR48Q8TAF3 677 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 SLC35B2Q8TB61 432 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 ACTL9Q8TC94 416 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 GLMNQ92990 594 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 NAT6Q93015 286 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 PPP1R16AQ96I34 528 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 CSPG4P5Q96PW8 444 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 FERMT1Q9BQL6 677 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 C2orf49Q9BVC5 232 aaPredicted RBP20.64■□□□□ 0.89
PSEN1-225ENST00000560005 TCEAL2Q9H3H9 227 aaPredicted RBP20.64■□□□□ 0.89
PSEN1-225ENST00000560005 R3HDM2Q9Y2K5 976 aaKnown RBP20.64■□□□□ 0.89
PSEN1-225ENST00000560005 HS3ST4Q9Y661 456 aa20.64■□□□□ 0.89
PSEN1-225ENST00000560005 FPGTO14772 594 aa20.63■□□□□ 0.89
PSEN1-225ENST00000560005 GCATO75600 419 aa20.63■□□□□ 0.89
PSEN1-225ENST00000560005 LEFTY1O75610 366 aa20.63■□□□□ 0.89
PSEN1-225ENST00000560005 DYNLT1P63172 113 aa20.63■□□□□ 0.89
PSEN1-225ENST00000560005 OTUD4Q01804 1114 aaKnown RBP20.63■□□□□ 0.89
PSEN1-225ENST00000560005 NRG1Q02297 640 aaPredicted RBP20.63■□□□□ 0.89
PSEN1-225ENST00000560005 EIF2B5Q13144 721 aaKnown RBP20.63■□□□□ 0.89
PSEN1-225ENST00000560005 MMRN1Q13201 1228 aa20.63■□□□□ 0.89
PSEN1-225ENST00000560005 C1orf61Q13536 156 aa20.63■□□□□ 0.89
PSEN1-225ENST00000560005 DUPD1Q68J44 220 aa20.63■□□□□ 0.89
PSEN1-225ENST00000560005 FBXO38Q6PIJ6 1188 aa20.63■□□□□ 0.89
PSEN1-225ENST00000560005 DPY19L3Q6ZPD9 716 aa20.63■□□□□ 0.89
PSEN1-225ENST00000560005 B3GNT8Q7Z7M8 397 aa20.63■□□□□ 0.89
PSEN1-225ENST00000560005 FBXO39Q8N4B4 442 aa20.63■□□□□ 0.89
PSEN1-225ENST00000560005 PLD5Q8N7P1 536 aa20.63■□□□□ 0.89
PSEN1-225ENST00000560005 PCDH19Q8TAB3 1148 aa20.63■□□□□ 0.89
PSEN1-225ENST00000560005 LIN37Q96GY3 246 aaPredicted RBP20.63■□□□□ 0.89
PSEN1-225ENST00000560005 FEM1CQ96JP0 617 aa20.63■□□□□ 0.89
PSEN1-225ENST00000560005 C1orf74Q96LT6 269 aa20.63■□□□□ 0.89
PSEN1-225ENST00000560005 CWC15Q9P013 229 aaKnown RBP20.63■□□□□ 0.89
PSEN1-225ENST00000560005 SPASTQ9UBP0 616 aa20.63■□□□□ 0.89
PSEN1-225ENST00000560005 PCDHGA7Q9Y5G6 932 aa20.63■□□□□ 0.89
PSEN1-225ENST00000560005 FADS3Q9Y5Q0 445 aa20.63■□□□□ 0.89
PSEN1-225ENST00000560005 RELNP78509 3460 aa20.63■□□□□ 0.89
PSEN1-225ENST00000560005 ATP8B1O43520 1251 aa20.62■□□□□ 0.89
PSEN1-225ENST00000560005 CNTN5O94779 1100 aa20.62■□□□□ 0.89
PSEN1-225ENST00000560005 RHOCP08134 193 aa20.62■□□□□ 0.89
PSEN1-225ENST00000560005 ADRB3P13945 408 aa20.62■□□□□ 0.89
PSEN1-225ENST00000560005 RECQLP46063 649 aaPredicted RBP20.62■□□□□ 0.89
PSEN1-225ENST00000560005 KCNJ1P48048 391 aa20.62■□□□□ 0.89
PSEN1-225ENST00000560005 CDH4P55283 916 aa20.62■□□□□ 0.89
PSEN1-225ENST00000560005 TPI1P60174 286 aa20.62■□□□□ 0.89
PSEN1-225ENST00000560005 EIF3EP60228 445 aaKnown RBP20.62■□□□□ 0.89
PSEN1-225ENST00000560005 ADCY2Q08462 1091 aa20.62■□□□□ 0.89
PSEN1-225ENST00000560005 PTK6Q13882 451 aa20.62■□□□□ 0.89
PSEN1-225ENST00000560005 NOMO1Q15155 1222 aa20.62■□□□□ 0.89
PSEN1-225ENST00000560005 PRRT3Q5FWE3 981 aa20.62■□□□□ 0.89
PSEN1-225ENST00000560005 C22orf39Q6P5X5 142 aa20.62■□□□□ 0.89
PSEN1-225ENST00000560005 EMBQ6PCB8 327 aa20.62■□□□□ 0.89
PSEN1-225ENST00000560005 MTERF4Q7Z6M4 381 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms