RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 SEMA3AQ14563 771 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 ZRSR2Q15696 482 aaKnown RBP14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 ADGRF1Q5T601 910 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 ZNF549Q6P9A3 640 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 PIM3Q86V86 326 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 MAB21L3Q8N8X9 362 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 RP9Q8TA86 221 aaKnown RBP14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 SHKBP1Q8TBC3 707 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 FAR2Q96K12 515 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 CATSPER2Q96P56 530 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 AGO1Q9UL18 857 aaKnown RBP14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 ARIH1Q9Y4X5 557 aaPredicted RBP14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 YIPF1Q9Y548 306 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 RFXAPO00287 272 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 FKBP6O75344 327 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 FGF18O76093 207 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 LUC7L3O95232 432 aaKnown RBP14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 SLC4A1P02730 911 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 SOD2P04179 222 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 ACADSP16219 412 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 SP100P23497 879 aaPredicted RBP14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 ALDH1A3P47895 512 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 ZNF140P52738 457 aaPredicted RBP14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 STC1P52823 247 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 PLK1P53350 603 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 CLNS1AP54105 237 aaKnown RBP14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 SATB1Q01826 763 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 GALNT1Q10472 559 aaPredicted RBP14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 TBL3Q12788 808 aaKnown RBP14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 PLD1Q13393 1074 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 TAF12Q16514 161 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 TYSND1Q2T9J0 566 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 TMEM198Q66K66 360 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 TPGS2Q68CL5 300 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 SDCCAG8Q86SQ7 713 aaPredicted RBP14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 ISCA2Q86U28 154 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 SNX32Q86XE0 403 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 AFAP1L2Q8N4X5 818 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 SH3RF2Q8TEC5 729 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 TRMT2BQ96GJ1 504 aaKnown RBP14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 CDKN2AIPNLQ96HQ2 116 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 EXOC2Q96KP1 924 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 NSMCE3Q96MG7 304 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 KLF16Q9BXK1 252 aaPredicted RBP14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 TDRD1Q9BXT4 1180 aaKnown RBP14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 RNF38Q9H0F5 515 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 ALG9Q9H6U8 611 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 POPDC3Q9HBV1 291 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 SCUBE2Q9NQ36 999 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 NLE1Q9NVX2 485 aaPredicted RBP14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 SPG21Q9NZD8 308 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 G3BP2Q9UN86 482 aaKnown RBP14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 TBC1D30Q9Y2I9 924 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 SPO11Q9Y5K1 396 aa14.47□□□□□ -0.09
RABGGTA-212ENST00000559974 UNC80Q8N2C7 3258 aa14.46□□□□□ -0.09
RABGGTA-212ENST00000559974 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.46□□□□□ -0.09
RABGGTA-212ENST00000559974 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.46□□□□□ -0.09
RABGGTA-212ENST00000559974 SDHDO14521 159 aa14.46□□□□□ -0.09
RABGGTA-212ENST00000559974 PDE5AO76074 875 aa14.46□□□□□ -0.09
RABGGTA-212ENST00000559974 PENKP01210 267 aaPredicted RBP14.46□□□□□ -0.09
RABGGTA-212ENST00000559974 IRF1P10914 325 aa14.46□□□□□ -0.09
RABGGTA-212ENST00000559974 ANPEPP15144 967 aa14.46□□□□□ -0.09
RABGGTA-212ENST00000559974 CES1P23141 567 aa14.46□□□□□ -0.09
RABGGTA-212ENST00000559974 BMPR1AP36894 532 aa14.46□□□□□ -0.09
RABGGTA-212ENST00000559974 SUOXP51687 545 aa14.46□□□□□ -0.09
RABGGTA-212ENST00000559974 HERC3Q15034 1050 aa14.46□□□□□ -0.09
RABGGTA-212ENST00000559974 CYTH1Q15438 398 aa14.46□□□□□ -0.09
RABGGTA-212ENST00000559974 PPM1LQ5SGD2 360 aa14.46□□□□□ -0.09
RABGGTA-212ENST00000559974 AAGABQ6PD74 315 aa14.46□□□□□ -0.09
RABGGTA-212ENST00000559974 CUZD1Q86UP6 607 aa14.46□□□□□ -0.09
RABGGTA-212ENST00000559974 FBXW8Q8N3Y1 598 aa14.46□□□□□ -0.09
RABGGTA-212ENST00000559974 RMDN1Q96DB5 314 aa14.46□□□□□ -0.09
RABGGTA-212ENST00000559974 PHF21BQ96EK2 531 aa14.46□□□□□ -0.09
RABGGTA-212ENST00000559974 INTS10Q9NVR2 710 aaKnown RBP14.46□□□□□ -0.09
RABGGTA-212ENST00000559974 MTF2Q9Y483 593 aaPredicted RBP14.46□□□□□ -0.09
RABGGTA-212ENST00000559974 C2orf78A6NCI8 922 aa14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 CBX4O00257 560 aa14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 TSPAN3O60637 253 aa14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 CD1EP15812 388 aa14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 CD1DP15813 335 aa14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 IMPDH1P20839 514 aa14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 PMLP29590 882 aa14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 ERFP50548 548 aa14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 NUDT2P50583 147 aa14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 MTTPP55157 894 aa14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 NFKB2Q00653 900 aa14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 TIAL1Q01085 375 aaKnown RBP eCLIP14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 DSG1Q02413 1049 aa14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 CAMK1Q14012 370 aa14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 CYLC2Q14093 348 aaPredicted RBP14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 TAF1AQ15573 450 aaPredicted RBP14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 GLT6D1Q7Z4J2 308 aa14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 PPFIBP2Q8ND30 876 aa14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 CEP70Q8NHQ1 597 aa14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 L3HYPDHQ96EM0 354 aa14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 DDX50Q9BQ39 737 aaKnown RBP14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 TRMOQ9BU70 441 aa14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 GSTO2Q9H4Y5 243 aa14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 ZBTB26Q9HCK0 441 aa14.45□□□□□ -0.1
RABGGTA-212ENST00000559974 COPG1Q9Y678 874 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms