RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 PTPN13Q12923 2485 aa14.77□□□□□ -0.05
CHD8-211ENST00000556833 BSNQ9UPA5 3926 aa14.76□□□□□ -0.05
CHD8-211ENST00000556833 IGHV5-10-1A0A0J9YXX1 117 aa14.76□□□□□ -0.05
CHD8-211ENST00000556833 CFAP69A5D8W1 941 aa14.76□□□□□ -0.05
CHD8-211ENST00000556833 LRRC53A6NM62 1247 aa14.76□□□□□ -0.05
CHD8-211ENST00000556833 HEXIM1O94992 359 aaKnown RBP14.76□□□□□ -0.05
CHD8-211ENST00000556833 CPNE6O95741 557 aa14.76□□□□□ -0.05
CHD8-211ENST00000556833 PNLIPP16233 465 aa14.76□□□□□ -0.05
CHD8-211ENST00000556833 CSF2RBP32927 897 aa14.76□□□□□ -0.05
CHD8-211ENST00000556833 CDK3Q00526 305 aa14.76□□□□□ -0.05
CHD8-211ENST00000556833 CTBSQ01459 385 aa14.76□□□□□ -0.05
CHD8-211ENST00000556833 DPYSQ14117 519 aa14.76□□□□□ -0.05
CHD8-211ENST00000556833 ASIC2Q16515 512 aa14.76□□□□□ -0.05
CHD8-211ENST00000556833 SNAP47Q5SQN1 464 aa14.76□□□□□ -0.05
CHD8-211ENST00000556833 E4F1Q66K89 784 aaPredicted RBP14.76□□□□□ -0.05
CHD8-211ENST00000556833 PLEKHA7Q6IQ23 1121 aa14.76□□□□□ -0.05
CHD8-211ENST00000556833 Q6ZVL8 140 aa14.76□□□□□ -0.05
CHD8-211ENST00000556833 APTXQ7Z2E3 356 aaKnown RBP14.76□□□□□ -0.05
CHD8-211ENST00000556833 IRF2BP2Q7Z5L9 587 aa14.76□□□□□ -0.05
CHD8-211ENST00000556833 ZSCAN1Q8NBB4 408 aa14.76□□□□□ -0.05
CHD8-211ENST00000556833 GPBAR1Q8TDU6 330 aa14.76□□□□□ -0.05
CHD8-211ENST00000556833 ART4Q93070 314 aa14.76□□□□□ -0.05
CHD8-211ENST00000556833 FRMD8Q9BZ67 464 aaPredicted RBP14.76□□□□□ -0.05
CHD8-211ENST00000556833 DONSONQ9NYP3 566 aa14.76□□□□□ -0.05
CHD8-211ENST00000556833 AKAP7Q9P0M2 348 aaPredicted RBP14.76□□□□□ -0.05
CHD8-211ENST00000556833 CNOT8Q9UFF9 292 aaKnown RBP14.76□□□□□ -0.05
CHD8-211ENST00000556833 COL12A1Q99715 3063 aa14.75□□□□□ -0.05
CHD8-211ENST00000556833 TMEM191CA6NGB0 347 aa14.75□□□□□ -0.05
CHD8-211ENST00000556833 PPM1DO15297 605 aa14.75□□□□□ -0.05
CHD8-211ENST00000556833 LRCH4O75427 683 aa14.75□□□□□ -0.05
CHD8-211ENST00000556833 FTLP02792 175 aaPredicted RBP14.75□□□□□ -0.05
CHD8-211ENST00000556833 FGF3P11487 239 aaPredicted RBP14.75□□□□□ -0.05
CHD8-211ENST00000556833 ITGB6P18564 788 aa14.75□□□□□ -0.05
CHD8-211ENST00000556833 IL1R2P27930 398 aa14.75□□□□□ -0.05
CHD8-211ENST00000556833 CD1CP29017 333 aa14.75□□□□□ -0.05
CHD8-211ENST00000556833 ADCY8P40145 1251 aa14.75□□□□□ -0.05
CHD8-211ENST00000556833 ACTR1BP42025 376 aa14.75□□□□□ -0.05
CHD8-211ENST00000556833 ARSDP51689 593 aa14.75□□□□□ -0.05
CHD8-211ENST00000556833 ACTR1AP61163 376 aa14.75□□□□□ -0.05
CHD8-211ENST00000556833 NSUN2Q08J23 767 aaKnown RBP eCLIP14.75□□□□□ -0.05
CHD8-211ENST00000556833 RFTN1Q14699 578 aaPredicted RBP14.75□□□□□ -0.05
CHD8-211ENST00000556833 STX1AQ16623 288 aa14.75□□□□□ -0.05
CHD8-211ENST00000556833 TSR1Q2NL82 804 aaKnown RBP14.75□□□□□ -0.05
CHD8-211ENST00000556833 FAM129CQ86XR2 697 aa14.75□□□□□ -0.05
CHD8-211ENST00000556833 PTRH1Q86Y79 214 aaKnown RBP14.75□□□□□ -0.05
CHD8-211ENST00000556833 NAGSQ8N159 534 aa14.75□□□□□ -0.05
CHD8-211ENST00000556833 DTD2Q96FN9 168 aa14.75□□□□□ -0.05
CHD8-211ENST00000556833 PSKH2Q96QS6 385 aa14.75□□□□□ -0.05
CHD8-211ENST00000556833 SYT11Q9BT88 431 aa14.75□□□□□ -0.05
CHD8-211ENST00000556833 TEX101Q9BY14 249 aa14.75□□□□□ -0.05
CHD8-211ENST00000556833 HSD3B7Q9H2F3 369 aa14.75□□□□□ -0.05
CHD8-211ENST00000556833 HAUS4Q9H6D7 363 aa14.75□□□□□ -0.05
CHD8-211ENST00000556833 ANO10Q9NW15 660 aa14.75□□□□□ -0.05
CHD8-211ENST00000556833 IL17BQ9UHF5 180 aa14.75□□□□□ -0.05
CHD8-211ENST00000556833 UBR5O95071 2799 aaPredicted RBP14.75□□□□□ -0.05
CHD8-211ENST00000556833 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.74□□□□□ -0.05
CHD8-211ENST00000556833 A0A1W2PQC6 194 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 A8MU76 341 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 H3BRJ5 948 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 PDE2AO00408 941 aaPredicted RBP14.74□□□□□ -0.05
CHD8-211ENST00000556833 INPP4BO15327 924 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 HTRA2O43464 458 aaPredicted RBP14.74□□□□□ -0.05
CHD8-211ENST00000556833 ITGB2P05107 769 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 HOXC4P09017 264 aaPredicted RBP14.74□□□□□ -0.05
CHD8-211ENST00000556833 SKILP12757 684 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 GPR1P46091 355 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 RENBPP51606 427 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 NCAPHQ15003 741 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 COLEC12Q5KU26 742 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 TMEM164Q5U3C3 297 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 TXNRD3NBQ6F5E7 133 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 ZNF571Q7Z3V5 609 aaPredicted RBP14.74□□□□□ -0.05
CHD8-211ENST00000556833 DTX1Q86Y01 620 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 ATPAF2Q8N5M1 289 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 IL22RA1Q8N6P7 574 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 LRRN4Q8WUT4 740 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 TMEM159Q96B96 161 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 BTBD6Q96KE9 485 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 NUDCD1Q96RS6 583 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 FUCA2Q9BTY2 467 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 NT5MQ9NPB1 228 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 STARD5Q9NSY2 213 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.74□□□□□ -0.05
CHD8-211ENST00000556833 OCIAD1Q9NX40 245 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 PRKAB1Q9Y478 270 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 TTLL3Q9Y4R7 772 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 B3GALT1Q9Y5Z6 326 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 DOPEY2Q9Y3R5 2298 aa14.74□□□□□ -0.05
CHD8-211ENST00000556833 EFCAB7A8K855 629 aa14.73□□□□□ -0.05
CHD8-211ENST00000556833 STMND1H3BQB6 276 aa14.73□□□□□ -0.05
CHD8-211ENST00000556833 DDX3XO00571 662 aaKnown RBP eCLIP14.73□□□□□ -0.051e-7■□□□□ 11
CHD8-211ENST00000556833 MAP3K6O95382 1288 aa14.73□□□□□ -0.05
CHD8-211ENST00000556833 PEX11BO96011 259 aa14.73□□□□□ -0.05
CHD8-211ENST00000556833 PDHA1P08559 390 aa14.73□□□□□ -0.05
CHD8-211ENST00000556833 CCDC172P0C7W6 258 aa14.73□□□□□ -0.05
CHD8-211ENST00000556833 CYP2A6P11509 494 aaPredicted RBP14.73□□□□□ -0.05
CHD8-211ENST00000556833 LIFP15018 202 aa14.73□□□□□ -0.05
CHD8-211ENST00000556833 GJC1P36383 396 aa14.73□□□□□ -0.05
CHD8-211ENST00000556833 ARL4AP40617 200 aa14.73□□□□□ -0.05
CHD8-211ENST00000556833 MAPK9P45984 424 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms