RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 A0A1W2PRG0 241 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 C4orf47A7E2U8 309 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 SOCS6O14544 535 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 GAGE7O76087 117 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 NKX2-2O95096 273 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 CCNDBP1O95273 360 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 GAGE12FP0CL80 117 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 GAGE12GP0CL81 117 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 GAGE12IP0CL82 117 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 TGFB3P10600 412 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 VDRP11473 427 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 ZNF182P17025 639 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-211ENST00000554437 MAOAP21397 527 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 CHMP24386 653 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 PSMA4P25789 261 aaKnown RBP5.09□□□□□ -1.59
SCFD1-211ENST00000554437 NFKBIAP25963 317 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 ART1P52961 327 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 RAD23BP54727 409 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 F2RL1P55085 397 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 KIF5AQ12840 1032 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 GAGE1Q13065 139 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 GAGE4Q13068 117 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 IZUMO4Q1ZYL8 232 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 PAPPA-AS1Q5QFB9 102 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 GGNBP1Q5YKI7 109 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 PLEKHA7Q6IQ23 1121 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 FAM180BQ6P0A1 224 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 WDR73Q6P4I2 378 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 CFAP161Q6P656 301 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 CRELD2Q6UXH1 353 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-211ENST00000554437 SLC36A4Q6YBV0 504 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 ZNF114Q8NC26 417 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 TMEM116Q8NCL8 245 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 MMABQ96EY8 250 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-211ENST00000554437 PERPQ96FX8 193 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 TMEM68Q96MH6 324 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 C1QTNF5Q9BXJ0 243 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 RSPH9Q9H1X1 276 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-211ENST00000554437 KCNN2Q9H2S1 579 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 PPP1R3EQ9H7J1 279 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 SCPEP1Q9HB40 452 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 DIAPH3Q9NSV4 1193 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 TTC7AQ9ULT0 858 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-211ENST00000554437 NOL7Q9UMY1 257 aaKnown RBP5.09□□□□□ -1.59
SCFD1-211ENST00000554437 PSAT1Q9Y617 370 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 PIAS3Q9Y6X2 628 aa5.09□□□□□ -1.59
SCFD1-211ENST00000554437 A0A087X0M5 115 aa5.08□□□□□ -1.6
SCFD1-211ENST00000554437 FAM237BA0A1B0GVD1 139 aa5.08□□□□□ -1.6
SCFD1-211ENST00000554437 A0A1B0GX30 115 aa5.08□□□□□ -1.6
SCFD1-211ENST00000554437 ACOT8O14734 319 aa5.08□□□□□ -1.6
SCFD1-211ENST00000554437 PLRG1O43660 514 aaKnown RBP5.08□□□□□ -1.6
SCFD1-211ENST00000554437 DDX5P17844 614 aaKnown RBP5.08□□□□□ -1.6
SCFD1-211ENST00000554437 RRM1P23921 792 aa5.08□□□□□ -1.6
SCFD1-211ENST00000554437 EIF5P55010 431 aaKnown RBP5.08□□□□□ -1.6
SCFD1-211ENST00000554437 CEBPZQ03701 1054 aaKnown RBP5.08□□□□□ -1.6
SCFD1-211ENST00000554437 SF3B4Q15427 424 aaKnown RBP eCLIP5.08□□□□□ -1.68e-8■■■□□ 18.5
SCFD1-211ENST00000554437 CTF1Q16619 201 aa5.08□□□□□ -1.6
SCFD1-211ENST00000554437 CCDC96Q2M329 555 aa5.08□□□□□ -1.6
SCFD1-211ENST00000554437 ATP13A5Q4VNC0 1218 aa5.08□□□□□ -1.6
SCFD1-211ENST00000554437 CXorf66Q5JRM2 361 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-211ENST00000554437 RUSC1-AS1Q66K80 236 aa5.08□□□□□ -1.6
SCFD1-211ENST00000554437 CYP20A1Q6UW02 462 aa5.08□□□□□ -1.6
SCFD1-211ENST00000554437 RBM23Q86U06 439 aaKnown RBP5.08□□□□□ -1.6
SCFD1-211ENST00000554437 FRMD1Q8N878 549 aa5.08□□□□□ -1.6
SCFD1-211ENST00000554437 C3orf30Q96M34 536 aa5.08□□□□□ -1.6
SCFD1-211ENST00000554437 SH3GL2Q99962 352 aa5.08□□□□□ -1.6
SCFD1-211ENST00000554437 SLC28A3Q9HAS3 691 aa5.08□□□□□ -1.6
SCFD1-211ENST00000554437 ABI3Q9P2A4 366 aa5.08□□□□□ -1.6
SCFD1-211ENST00000554437 CNOT8Q9UFF9 292 aaKnown RBP5.08□□□□□ -1.6
SCFD1-211ENST00000554437 ZNF580Q9UK33 172 aa5.08□□□□□ -1.6
SCFD1-211ENST00000554437 PCDHGB1Q9Y5G3 927 aa5.08□□□□□ -1.6
SCFD1-211ENST00000554437 TDRD9Q8NDG6 1382 aaKnown RBP5.07□□□□□ -1.6
SCFD1-211ENST00000554437 SRRM3A6NNA2 597 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-211ENST00000554437 VCYO14598 125 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 HNRNPCL1O60812 293 aaKnown RBP5.07□□□□□ -1.6
SCFD1-211ENST00000554437 IPO7O95373 1038 aaKnown RBP5.07□□□□□ -1.6
SCFD1-211ENST00000554437 CLDN14O95500 239 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 FTCDO95954 541 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 FGF3P11487 239 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-211ENST00000554437 SRCP12931 536 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 DAOP14920 347 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 ITGB6P18564 788 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 CALRP27797 417 aaKnown RBP5.07□□□□□ -1.6
SCFD1-211ENST00000554437 ECT2LQ008S8 904 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 CSTF3Q12996 717 aaKnown RBP5.07□□□□□ -1.6
SCFD1-211ENST00000554437 MED22Q15528 200 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 KIF19Q2TAC6 998 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 CCDC184Q52MB2 194 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 CCDC30Q5VVM6 783 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 SIGIRRQ6IA17 410 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 CAPRIN2Q6IMN6 1127 aaKnown RBP5.07□□□□□ -1.6
SCFD1-211ENST00000554437 TTI2Q6NXR4 508 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 MZT2BQ6NZ67 158 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 PRSS57Q6UWY2 283 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 PQLC2Q6ZP29 291 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 C16orf82Q7Z2V1 217 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 PXKQ7Z7A4 578 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 FOXRED2Q8IWF2 684 aa5.07□□□□□ -1.6
SCFD1-211ENST00000554437 LILRB1Q8NHL6 650 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-211ENST00000554437 LMO3Q8TAP4 145 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms