RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-223	ENST00000553686	PPP3CC	P48454	512 aa		6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	DUSP3	P51452	185 aa	Predicted RBP	6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	RCAN1	P53805	252 aa		6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	FOXI1	Q12951	378 aa		6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	NFE2	Q16621	373 aa	Predicted RBP	6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	SRRM1	Q8IYB3	904 aa	Known RBP	6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	SAP25	Q8TEE9	199 aa		6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686		Q96MF0	132 aa		6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	SLC46A1	Q96NT5	459 aa		6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	MED15	Q96RN5	788 aa		6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	TSPAN18	Q96SJ8	248 aa		6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	NAP1L4	Q99733	375 aa	Known RBP	6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	HSD17B14	Q9BPX1	270 aa		6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	PACSIN1	Q9BY11	444 aa		6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	ABCG4	Q9H172	646 aa		6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	CDT1	Q9H211	546 aa		6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	ADNP	Q9H2P0	1102 aa		6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	KCNMB3	Q9NPA1	279 aa		6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	CD93	Q9NPY3	652 aa		6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	ASCL3	Q9NQ33	180 aa		6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	TBCCD1	Q9NVR7	557 aa		6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	EHD2	Q9NZN4	543 aa		6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	JKAMP	Q9P055	326 aa		6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	UBQLN1	Q9UMX0	589 aa	Known RBP	6.15	□□□□□ -1.42
ATXN3-223	ENST00000553686	ABCA2	Q9BZC7	2435 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	SLC43A1	O75387	559 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	PDC	P20941	246 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	MAL	P21145	153 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	BMP5	P22003	454 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	SEC24C	P53992	1094 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	BCAT1	P54687	386 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	LILRA4	P59901	499 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	SLC7A9	P82251	487 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	MYL7	Q01449	175 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	TSPY1	Q01534	308 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	FUT11	Q495W5	492 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	FLYWCH1	Q4VC44	716 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	FHL5	Q5TD97	284 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	OLFML1	Q6UWY5	402 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	ARL14	Q8N4G2	192 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	OR10T2	Q8NGX3	314 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	SSC4D	Q8WTU2	575 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	FUBP1	Q96AE4	644 aa	Known RBP	6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	ERLEC1	Q96DZ1	483 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	XPO6	Q96QU8	1125 aa	Known RBP	6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	ACOX2	Q99424	681 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	ACO2	Q99798	780 aa	Known RBP	6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	EIF2AK1	Q9BQI3	630 aa	Known RBP	6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	LRRC2	Q9BYS8	371 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	PTPRH	Q9HD43	1115 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	GDF3	Q9NR23	364 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	SH3GLB2	Q9NR46	395 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	RAD54B	Q9Y620	910 aa		6.14	□□□□□ -1.43
ATXN3-223	ENST00000553686	EML5	Q05BV3	1969 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	KCNJ18	B7U540	433 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	SLC37A4	O43826	429 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	CS	O75390	466 aa	Known RBP	6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	ESRRB	O95718	433 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	CD1A	P06126	327 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	CYP11B2	P19099	503 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	ANAPC15	P60006	121 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	EXOSC10	Q01780	885 aa	Known RBP	6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	MORC3	Q14149	939 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	C20orf194	Q5TEA3	1177 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	GALNT17	Q6IS24	598 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	ZBTB46	Q86UZ6	589 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686		Q8NA96	180 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	PIGO	Q8TEQ8	1089 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	PTCD3	Q96EY7	689 aa	Known RBP	6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	TLR10	Q9BXR5	811 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	IL25	Q9H293	177 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	UNKL	Q9H9P5	680 aa	Known RBP	6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	CASS4	Q9NQ75	786 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	SPHK2	Q9NRA0	654 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	CFAP97	Q9P2B7	532 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	WDR35	Q9P2L0	1181 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	TUBGCP4	Q9UGJ1	667 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	ZNHIT2	Q9UHR6	403 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	NAP1L2	Q9ULW6	460 aa	Predicted RBP	6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	SLC45A2	Q9UMX9	530 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	PCDHA12	Q9UN75	941 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	LUC7L2	Q9Y383	392 aa	Known RBP	6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	CPQ	Q9Y646	472 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	STON1	Q9Y6Q2	735 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	PTPRB	P23467	1997 aa		6.13	□□□□□ -1.43
ATXN3-223	ENST00000553686	CENPE	Q02224	2701 aa		6.12	□□□□□ -1.43
ATXN3-223	ENST00000553686	NBPF19	A0A087WUL8	3843 aa		6.12	□□□□□ -1.43
ATXN3-223	ENST00000553686	KLF18	A0A0U1RQI7	1052 aa		6.12	□□□□□ -1.43
ATXN3-223	ENST00000553686	WASH3P	C4AMC7	463 aa		6.12	□□□□□ -1.43
ATXN3-223	ENST00000553686	MUC22	E2RYF6	1773 aa	Predicted RBP	6.12	□□□□□ -1.43
ATXN3-223	ENST00000553686	CCER2	I3L3R5	266 aa		6.12	□□□□□ -1.43
ATXN3-223	ENST00000553686	OVOL3	O00110	214 aa		6.12	□□□□□ -1.43
ATXN3-223	ENST00000553686	CYB561D2	O14569	222 aa		6.12	□□□□□ -1.43
ATXN3-223	ENST00000553686	TSPAN3	O60637	253 aa		6.12	□□□□□ -1.43
ATXN3-223	ENST00000553686	ZFPL1	O95159	310 aa		6.12	□□□□□ -1.43
ATXN3-223	ENST00000553686	EDN1	P05305	212 aa		6.12	□□□□□ -1.43
ATXN3-223	ENST00000553686	CLTA	P09496	248 aa		6.12	□□□□□ -1.43
ATXN3-223	ENST00000553686	FDXR	P22570	491 aa		6.12	□□□□□ -1.43
ATXN3-223	ENST00000553686	EPHA8	P29322	1005 aa	Predicted RBP	6.12	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms