RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 CHATP28329 748 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 RAD52P43351 418 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 C21orf58P58505 322 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 ADORA2A-AS1P86434 159 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 ST3GAL1Q11201 340 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 COLEC12Q5KU26 742 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 PLEKHS1Q5SXH7 462 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 C6orf141Q5SZD1 244 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 PXDC1Q5TGL8 231 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 DCAF12L2Q5VW00 463 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 JADE1Q6IE81 842 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 LCTLQ6UWM7 567 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 GLDNQ6ZMI3 551 aaPredicted RBP5.03□□□□□ -1.6
LIMA1-205ENST00000550592 CHST9Q7L1S5 443 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 SZRD1Q7Z422 152 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 MRPL10Q7Z7H8 261 aaKnown RBP5.03□□□□□ -1.6
LIMA1-205ENST00000550592 TICAM1Q8IUC6 712 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 UNC5CLQ8IV45 518 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 WDR63Q8IWG1 891 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 SLC35F3Q8IY50 421 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 BEST2Q8NFU1 509 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 GPT2Q8TD30 523 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 ARHGEF26Q96DR7 871 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 SLC41A2Q96JW4 573 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 C1orf74Q96LT6 269 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 FAM110AQ9BQ89 295 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 C1QTNF5Q9BXJ0 243 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 SMARCAD1Q9H4L7 1026 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 DDX4Q9NQI0 724 aaKnown RBP5.03□□□□□ -1.6
LIMA1-205ENST00000550592 CYSLTR2Q9NS75 346 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 RRP7BPQ9NSQ0 103 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 NRBP1Q9UHY1 535 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 TTLL3Q9Y4R7 772 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 MROH1Q8NDA8 1641 aa5.03□□□□□ -1.6
LIMA1-205ENST00000550592 DHX29Q7Z478 1369 aaKnown RBP5.03□□□□□ -1.6
LIMA1-205ENST00000550592 LY6G6EA0A0G2JKS1 128 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 IGLV5-39A0A0G2JS06 123 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 HCRTR2O43614 444 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 TIMM44O43615 452 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 LDB2O43679 373 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 SLC25A12O75746 678 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 NDUFB4O95168 129 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 CBSLP0DN79 551 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 ARSBP15848 533 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 TNFRSF1BP20333 461 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 ACSL1P33121 698 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 CBSP35520 551 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 ACTN2P35609 894 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 CDH8P55286 799 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 ZP1P60852 638 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 EPS8Q12929 822 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 CHAF1BQ13112 559 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 IRF3Q14653 427 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 SOWAHCQ53LP3 525 aaPredicted RBP5.02□□□□□ -1.61
LIMA1-205ENST00000550592 GKAP1Q5VSY0 366 aaPredicted RBP5.02□□□□□ -1.61
LIMA1-205ENST00000550592 FBXO46Q6PJ61 603 aaPredicted RBP5.02□□□□□ -1.61
LIMA1-205ENST00000550592 QSOX2Q6ZRP7 698 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 MB21D2Q8IYB1 491 aaPredicted RBP5.02□□□□□ -1.61
LIMA1-205ENST00000550592 SRBD1Q8N5C6 995 aaKnown RBP5.02□□□□□ -1.61
LIMA1-205ENST00000550592 ZNF548Q8NEK5 533 aaPredicted RBP5.02□□□□□ -1.61
LIMA1-205ENST00000550592 HUS1BQ8NHY5 278 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 LPAR1Q92633 364 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 RPL36ALQ969Q0 106 aaKnown RBP5.02□□□□□ -1.61
LIMA1-205ENST00000550592 PGAM5Q96HS1 289 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 RANGRFQ9HD47 186 aaPredicted RBP5.02□□□□□ -1.61
LIMA1-205ENST00000550592 PLSCR4Q9NRQ2 329 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 ZBTB40Q9NUA8 1239 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 TROQ12816 1431 aaPredicted RBP5.02□□□□□ -1.61
LIMA1-205ENST00000550592 CDC42BPBQ9Y5S2 1711 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 TMEM2Q9UHN6 1383 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 ADGBQ8N7X0 1667 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 CAMTA1Q9Y6Y1 1673 aa5.02□□□□□ -1.61
LIMA1-205ENST00000550592 CAMSAP2Q08AD1 1489 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 ARHGAP35Q9NRY4 1499 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 BTBD18B2RXH4 712 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 I6L893 689 aaPredicted RBP5.01□□□□□ -1.61
LIMA1-205ENST00000550592 TMCC2O75069 709 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 NDUFS3O75489 264 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 NKX2-2O95096 273 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 TMEM191BP0C7N4 346 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 MCM3P25205 808 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 ABCG1P45844 678 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 PTGR1Q14914 329 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 C2orf68Q2NKX9 166 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 RAB41Q5JT25 222 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 DLK2Q6UY11 383 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 GALNT5Q7Z7M9 940 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 HAPLN4Q86UW8 402 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 ZBTB2Q8N680 514 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 DENND1AQ8TEH3 1009 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 PPP1R13BQ96KQ4 1090 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 ZNF570Q96NI8 536 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 SERINC2Q96SA4 455 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 NCAPGQ9BPX3 1015 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 SYT17Q9BSW7 474 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 SPRTNQ9H040 489 aaPredicted RBP5.01□□□□□ -1.61
LIMA1-205ENST00000550592 CATSPERBQ9H7T0 1116 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 POLG2Q9UHN1 485 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 SESN1Q9Y6P5 492 aa5.01□□□□□ -1.61
LIMA1-205ENST00000550592 SPHKAPQ2M3C7 1700 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms