RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 SCUBE2Q9NQ36 999 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 LRCH1Q9Y2L9 728 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 FIS1Q9Y3D6 152 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 CBX4O00257 560 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 TSPAN3O60637 253 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 IRF1P10914 325 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 ARSAP15289 507 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 CES1P23141 567 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 ATN1P54259 1190 aaPredicted RBP14□□□□□ -0.17
LIMK1-208ENST00000538333 ARHGEF6Q15052 776 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 OR4D1Q15615 310 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 AFTPHQ6ULP2 937 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 C16orf59Q7L2K0 433 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 KBTBD6Q86V97 674 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 PGAM4Q8N0Y7 254 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 AFAP1L2Q8N4X5 818 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 RHEBL1Q8TAI7 183 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 RMDN1Q96DB5 314 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 ZFRQ96KR1 1074 aaKnown RBP14□□□□□ -0.17
LIMK1-208ENST00000538333 ATOH8Q96SQ7 321 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 STK39Q9UEW8 545 aa14□□□□□ -0.17
LIMK1-208ENST00000538333 CCDC189A1A4V9 331 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 SUPT7LO94864 414 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 BAG2O95816 211 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 PMLP29590 882 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 PIGGQ5H8A4 983 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 RNF219Q5W0B1 726 aaPredicted RBP13.99□□□□□ -0.17
LIMK1-208ENST00000538333 DHDDSQ86SQ9 333 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 TMEM150AQ86TG1 271 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 SLC26A7Q8TE54 656 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 DEFB118Q96PH6 123 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 MYCBPQ99417 103 aaPredicted RBP13.99□□□□□ -0.17
LIMK1-208ENST00000538333 TRPC7Q9HCX4 862 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 OGDHLQ9ULD0 1010 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 TRAF6Q9Y4K3 522 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 PCDHGC4Q9Y5F7 938 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 RAI2Q9Y5P3 530 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 SMIM24O75264 130 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 C1RP00736 705 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 DPP6P42658 865 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 ALDH1A3P47895 512 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 PDAP1Q13442 181 aaKnown RBP13.99□□□□□ -0.17
LIMK1-208ENST00000538333 ZRSR2Q15696 482 aaKnown RBP13.99□□□□□ -0.17
LIMK1-208ENST00000538333 PPP1R3AQ16821 1122 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 ZNF423Q2M1K9 1284 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 UGT3A2Q3SY77 523 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 FAM219BQ5XKK7 198 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 TFB2MQ9H5Q4 396 aaKnown RBP13.99□□□□□ -0.17
LIMK1-208ENST00000538333 PACSIN3Q9UKS6 424 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 TRIM17Q9Y577 477 aa13.99□□□□□ -0.17
LIMK1-208ENST00000538333 LTBP2Q14767 1821 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 C2orf81A6NN90 581 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 ANKRD66B4E2M5 251 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 H3BNX3 289 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 SNAP91O60641 907 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 TMCC1O94876 653 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 MYCP01106 439 aaPredicted RBP13.98□□□□□ -0.17
LIMK1-208ENST00000538333 TSPAN8P19075 237 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 THOP1P52888 689 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 TRAF2Q12933 501 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 PTK2BQ14289 1009 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 CLEC6AQ6EIG7 209 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 ZNF783Q6ZMS7 281 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 BNC2Q6ZN30 1099 aaPredicted RBP13.98□□□□□ -0.17
LIMK1-208ENST00000538333 LPCAT1Q8NF37 534 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 CDRT15Q96T59 188 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 TCF12Q99081 682 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 SERPINI1Q99574 410 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 MUC3BQ9H195 1237 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 EFCAB1Q9HAE3 211 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 MRGBPQ9NV56 204 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 UBA6A0AVT1 1052 aaPredicted RBP13.98□□□□□ -0.17
LIMK1-208ENST00000538333 UBXN8O00124 270 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 GFRA2O00451 464 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 GREM1O60565 184 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 SMNDC1O75940 238 aaKnown RBP eCLIP13.98□□□□□ -0.17
LIMK1-208ENST00000538333 LPOP22079 712 aaPredicted RBP13.98□□□□□ -0.17
LIMK1-208ENST00000538333 PPP3CCP48454 512 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 CDKN1CP49918 316 aaPredicted RBP13.98□□□□□ -0.17
LIMK1-208ENST00000538333 SH3BP2P78314 561 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 IRGCQ6NXR0 463 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 NCEH1Q6PIU2 408 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 PAQR3Q6TCH7 311 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 LINGO4Q6UY18 593 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 LARP4Q71RC2 724 aaKnown RBP eCLIP13.98□□□□□ -0.17
LIMK1-208ENST00000538333 DNAJB7Q7Z6W7 309 aaPredicted RBP13.98□□□□□ -0.17
LIMK1-208ENST00000538333 SLC39A11Q8N1S5 342 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 RYBPQ8N488 228 aaPredicted RBP13.98□□□□□ -0.17
LIMK1-208ENST00000538333 PTGR2Q8N8N7 351 aaPredicted RBP13.98□□□□□ -0.17
LIMK1-208ENST00000538333 KIAA1191Q96A73 305 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 BIRC8Q96P09 236 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 SLC22A12Q96S37 553 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 DDX50Q9BQ39 737 aaKnown RBP13.98□□□□□ -0.17
LIMK1-208ENST00000538333 DERL2Q9GZP9 239 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 WDR41Q9HAD4 459 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 SMPD4Q9NXE4 827 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 TAS2R13Q9NYV9 303 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 LHX3Q9UBR4 397 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 ADAMTS6Q9UKP5 1117 aa13.98□□□□□ -0.17
LIMK1-208ENST00000538333 KIAA1671Q9BY89 1806 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms