RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 HS6ST1O60243 411 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 LRATO95237 230 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 PIGRP01833 764 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 HNF4AP41235 474 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 HSPA13P48723 471 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 CD97P48960 835 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 CLCN5P51795 746 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 NAB1Q13506 487 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 ANKDD1AQ495B1 522 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 SPRYD7Q5W111 196 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 GCNT7Q6ZNI0 430 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 CUZD1Q86UP6 607 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 PARP8Q8N3A8 854 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 TMEM159Q96B96 161 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 AGO1Q9UL18 857 aaKnown RBP12.25□□□□□ -0.45
BDNF-218ENST00000533246 KDM3BQ7LBC6 1761 aa12.25□□□□□ -0.45
BDNF-218ENST00000533246 SPEF2Q9C093 1822 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 E9PAM4 449 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 AGRPO00253 132 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 RGS5O15539 181 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 DEAF1O75398 565 aaPredicted RBP12.24□□□□□ -0.45
BDNF-218ENST00000533246 GCATO75600 419 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 PCDH8O95206 1070 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 IRF9Q00978 393 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 SLC25A11Q02978 314 aaKnown RBP12.24□□□□□ -0.45
BDNF-218ENST00000533246 MSLNQ13421 630 aaPredicted RBP12.24□□□□□ -0.45
BDNF-218ENST00000533246 DGCR6Q14129 220 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 MAPK11Q15759 364 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 ARHGAP15Q53QZ3 475 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 CLEC20AQ6ZU45 233 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 WDTC1Q8N5D0 677 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 OR4L1Q8NH43 312 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 XYLT2Q9H1B5 865 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 FAM149AA5PLN7 773 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 KCNU1A8MYU2 1149 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 ITM2AO43736 263 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 ONECUT3O60422 494 aaPredicted RBP12.24□□□□□ -0.45
BDNF-218ENST00000533246 MTRF1O75570 445 aaKnown RBP12.24□□□□□ -0.45
BDNF-218ENST00000533246 NOVP48745 357 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 CAMK2GQ13555 558 aaPredicted RBP12.24□□□□□ -0.45
BDNF-218ENST00000533246 HIST2H2ACQ16777 129 aaPredicted RBP12.24□□□□□ -0.45
BDNF-218ENST00000533246 HIST2H2AA3Q6FI13 130 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 NET1Q7Z628 596 aaPredicted RBP12.24□□□□□ -0.45
BDNF-218ENST00000533246 CCDC103Q8IW40 242 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 NAT16Q8N8M0 369 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 DGCR6LQ9BY27 220 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 AAASQ9NRG9 546 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 A0A087X1B8 175 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 CKBP12277 381 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 TYMPP19971 482 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 ECHS1P30084 290 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 NEK3P51956 506 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 LIMK2P53671 638 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 PDK3Q15120 406 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 TRIM60Q495X7 471 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 ACSBG2Q5FVE4 666 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 DHRSXQ8N5I4 330 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 ZNF614Q8N883 585 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 ITFG1Q8TB96 612 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 LINGO1Q96FE5 620 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 C2orf49Q9BVC5 232 aaPredicted RBP12.24□□□□□ -0.45
BDNF-218ENST00000533246 SLC39A8Q9C0K1 460 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 SORCS3Q9UPU3 1222 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 U3KQV3 271 aa12.24□□□□□ -0.45
BDNF-218ENST00000533246 AZIN1O14977 448 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 TIPRLO75663 272 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 SLC16A1P53985 500 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 RPL38P63173 70 aaKnown RBP12.23□□□□□ -0.45
BDNF-218ENST00000533246 IRF8Q02556 426 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 FAM98BQ52LJ0 330 aaKnown RBP12.23□□□□□ -0.45
BDNF-218ENST00000533246 INTS6LQ5JSJ4 861 aaKnown RBP12.23□□□□□ -0.45
BDNF-218ENST00000533246 DBF4BQ8NFT6 615 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 NPLOC4Q8TAT6 608 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 PPM1MQ96MI6 270 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 DEPDC7Q96QD5 511 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 CIB1Q99828 191 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 HAPLN2Q9GZV7 340 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 CYTH4Q9UIA0 394 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 DERAQ9Y315 318 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 PSAT1Q9Y617 370 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 PARP4Q9UKK3 1724 aaKnown RBP12.23□□□□□ -0.45
BDNF-218ENST00000533246 ASNA1O43681 348 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 C1RP00736 705 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 TFPTP0C1Z6 253 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 MLNP12872 115 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 MSH3P20585 1137 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 LPOP22079 712 aaPredicted RBP12.23□□□□□ -0.45
BDNF-218ENST00000533246 PSMB9P28065 219 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 MC4RP32245 332 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 S100A3P33764 101 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 HECTD2Q5U5R9 776 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 SDE2Q6IQ49 451 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 CYP4V2Q6ZWL3 525 aaPredicted RBP12.23□□□□□ -0.45
BDNF-218ENST00000533246 TDRPQ86YL5 185 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 TRAPPC5Q8IUR0 188 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 MCOLN3Q8TDD5 553 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 ACAT2Q9BWD1 397 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 TRPC4Q9UBN4 977 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 INVSQ9Y283 1065 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 ASCC3Q8N3C0 2202 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms