RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 LAMA4Q16363 1823 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 WDR47O94967 919 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 RPN2P04844 631 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 DEFA1P59665 94 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 DEFA3P59666 94 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 CNSTQ6PJW8 725 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 CIR1Q86X95 450 aaPredicted RBP15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 WDTC1Q8N5D0 677 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 TDRKHQ9Y2W6 561 aaKnown RBP15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 AP4B1Q9Y6B7 739 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 PGM3O95394 542 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 PARNO95453 639 aaKnown RBP15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 SLC18A2Q05940 514 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 ZNF618Q5T7W0 954 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 FIBCD1Q8N539 461 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 UTP15Q8TED0 518 aaKnown RBP15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 SUSD6Q92537 303 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 DEFB118Q96PH6 123 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 APOL4Q9BPW4 351 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 PNPLA8Q9NP80 782 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 ZNF358Q9NW07 568 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 MAPRE3Q9UPY8 281 aa15.31■□□□□ 0.04
PCDHA3-202ENST00000532566 IGKV6-21A0A0C4DH24 114 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 NPEPPSL1A6NEC2 478 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 CA12O43570 354 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 CNOT3O75175 753 aaKnown RBP15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 C4AP0C0L4 1744 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 CLDN10P78369 228 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 FOLH1Q04609 750 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 PAFAH1B3Q15102 231 aaKnown RBP15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 TTC23Q5W5X9 447 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 ZNF549Q6P9A3 640 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 DBF4BQ8NFT6 615 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 TCF12Q99081 682 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 EBF4Q9BQW3 602 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 C16orf70Q9BSU1 422 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 PCDHGC4Q9Y5F7 938 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 A0A0U1RQF3 1178 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 TGM3Q08188 693 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 ZNF460Q14592 562 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 CYP2A13Q16696 494 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 NAIF1Q69YI7 327 aaPredicted RBP15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 GCNT7Q6ZNI0 430 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 NPAS4Q8IUM7 802 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 BRSK1Q8TDC3 778 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 DDX18Q9NVP1 670 aaKnown RBP15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 ZNF510Q9Y2H8 683 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 GOLGA4Q13439 2230 aaKnown RBP15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 FTH1P02794 183 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 PRKCHP24723 683 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 SLC1A2P43004 574 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 RPL5P46777 297 aaKnown RBP15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 GHRHRQ02643 423 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 DEPDC1Q5TB30 811 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 LPCAT4Q643R3 524 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 MAB21L3Q8N8X9 362 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 DCUN1D5Q9BTE7 237 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 ADAMTS5Q9UNA0 930 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 TLR6Q9Y2C9 796 aa15.3■□□□□ 0.04
PCDHA3-202ENST00000532566 SNTNA6NMZ2 147 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 NPHS1O60500 1241 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 PSMB9P28065 219 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 RXRGP48443 463 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 PRKCZQ05513 592 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 C6orf89Q6UWU4 347 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 TSPAN14Q8NG11 270 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 TWIST2Q8WVJ9 160 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 SUSD3Q96L08 255 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 SIGLEC10Q96LC7 697 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 ZMAT2Q96NC0 199 aaKnown RBP15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 OSBPL11Q9BXB4 747 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 SLC7A5P2Q9GIP4 190 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 MCM8Q9UJA3 840 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 TJP1Q07157 1748 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 TMEM88BA6NKF7 163 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 ZNF487B1APH4 448 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 PIRO00625 290 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 NRP1O14786 923 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 KLF11O14901 512 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 INSIG1O15503 277 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 GOT2P00505 430 aaKnown RBP15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 UQCRBP14927 111 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 SGCGQ13326 291 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 TRIM16LQ309B1 348 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 TRIM60Q495X7 471 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 SPATA19Q7Z5L4 167 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 GPR180Q86V85 440 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 ADCY4Q8NFM4 1077 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 ROGDIQ9GZN7 287 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 RIBC2Q9H4K1 309 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 TPRKBQ9Y3C4 175 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 CACNA1SQ13698 1873 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 PTGES3LE9PB15 166 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 BCL10O95999 233 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 ARL4DP49703 201 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 LCP2Q13094 533 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 CLEC6AQ6EIG7 209 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 LINGO4Q6UY18 593 aa15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 PIWIL1Q96J94 861 aaKnown RBP15.29■□□□□ 0.04
PCDHA3-202ENST00000532566 REEP1Q9H902 201 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms