RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 RIC8AQ9NPQ8 531 aa3.2□□□□□ -1.9
ATM-217ENST00000531957 TMEM30AQ9NV96 361 aa3.2□□□□□ -1.9
ATM-217ENST00000531957 MCM9Q9NXL9 1143 aa3.2□□□□□ -1.9
ATM-217ENST00000531957 CNOT7Q9UIV1 285 aaKnown RBP3.2□□□□□ -1.9
ATM-217ENST00000531957 FAF1Q9UNN5 650 aaPredicted RBP3.2□□□□□ -1.9
ATM-217ENST00000531957 AMDHD2Q9Y303 409 aa3.2□□□□□ -1.9
ATM-217ENST00000531957 GREB1LQ9C091 1923 aaPredicted RBP3.19□□□□□ -1.9
ATM-217ENST00000531957 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 AKR1B15C9JRZ8 316 aaPredicted RBP3.19□□□□□ -1.9
ATM-217ENST00000531957 FAM72CH0Y354 149 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 PIP5K1CO60331 668 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 TFP02787 698 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 IFIT1P09914 478 aaKnown RBP3.19□□□□□ -1.9
ATM-217ENST00000531957 GM2AP17900 193 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 MAOAP21397 527 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 GNL1P36915 607 aaPredicted RBP3.19□□□□□ -1.9
ATM-217ENST00000531957 SORDQ00796 357 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 PPFIA1Q13136 1202 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 RNPS1Q15287 305 aaKnown RBP3.19□□□□□ -1.9
ATM-217ENST00000531957 CCDC6Q16204 474 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 FAM72AQ5TYM5 149 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 FAM72DQ6L9T8 149 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 CPLX2Q6PUV4 134 aaKnown RBP3.19□□□□□ -1.9
ATM-217ENST00000531957 LRRC8DQ7L1W4 858 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 LINGO2Q7L985 606 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 RRM2BQ7LG56 351 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 NFE4Q86UQ8 179 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 FAM72BQ86X60 149 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 KMT5CQ86Y97 462 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 C11orf65Q8NCR3 313 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 HMGCLL1Q8TB92 370 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 PPM1EQ8WY54 764 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 PABPC5Q96DU9 382 aaKnown RBP3.19□□□□□ -1.9
ATM-217ENST00000531957 KIF1BPQ96EK5 621 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 INTS2Q9H0H0 1204 aaKnown RBP3.19□□□□□ -1.9
ATM-217ENST00000531957 MMP25Q9NPA2 562 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 TCF19Q9Y242 345 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 GPR52Q9Y2T5 361 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 OR2W1Q9Y3N9 320 aa3.19□□□□□ -1.9
ATM-217ENST00000531957 TEX13CA0A0J9YWL9 993 aa3.18□□□□□ -1.9
ATM-217ENST00000531957 GOLGA6L10A0A0M3HER8 536 aa3.18□□□□□ -1.9
ATM-217ENST00000531957 SNAP23O00161 211 aa3.18□□□□□ -1.9
ATM-217ENST00000531957 EIF3FO00303 357 aaPredicted RBP3.18□□□□□ -1.9
ATM-217ENST00000531957 DVL1O14640 695 aa3.18□□□□□ -1.9
ATM-217ENST00000531957 EDIL3O43854 480 aa3.18□□□□□ -1.9
ATM-217ENST00000531957 CD53P19397 219 aa3.18□□□□□ -1.9
ATM-217ENST00000531957 BDKRB2P30411 391 aa3.18□□□□□ -1.9
ATM-217ENST00000531957 GGT5P36269 586 aa3.18□□□□□ -1.9
ATM-217ENST00000531957 CDKN1AP38936 164 aa3.18□□□□□ -1.9
ATM-217ENST00000531957 USP8P40818 1118 aa3.18□□□□□ -1.9
ATM-217ENST00000531957 DVL1P1P54792 670 aaPredicted RBP3.18□□□□□ -1.9
ATM-217ENST00000531957 PITX1P78337 314 aaPredicted RBP3.18□□□□□ -1.9
ATM-217ENST00000531957 SREBF2Q12772 1141 aa3.18□□□□□ -1.9
ATM-217ENST00000531957 FOXD4Q12950 439 aaPredicted RBP3.18□□□□□ -1.9
ATM-217ENST00000531957 HIST2H2ACQ16777 129 aaPredicted RBP3.18□□□□□ -1.9
ATM-217ENST00000531957 TXNDC8Q6A555 127 aa3.18□□□□□ -1.9
ATM-217ENST00000531957 KCTD18Q6PI47 426 aaPredicted RBP3.18□□□□□ -1.9
ATM-217ENST00000531957 QSOX2Q6ZRP7 698 aa3.18□□□□□ -1.9
ATM-217ENST00000531957 KCTD8Q6ZWB6 473 aa3.18□□□□□ -1.9
ATM-217ENST00000531957 RNF113BQ8IZP6 322 aaKnown RBP3.18□□□□□ -1.9
ATM-217ENST00000531957 SPATA6LQ8N4H0 392 aa3.18□□□□□ -1.9
ATM-217ENST00000531957 CTCFLQ8NI51 663 aaPredicted RBP3.18□□□□□ -1.9
ATM-217ENST00000531957 HERVK_113Q902F9 699 aa3.18□□□□□ -1.9
ATM-217ENST00000531957 KLHL15Q96M94 604 aa3.18□□□□□ -1.9
ATM-217ENST00000531957 DUX3Q96PT4 197 aa3.18□□□□□ -1.9
ATM-217ENST00000531957 MTERF1Q99551 399 aaKnown RBP3.18□□□□□ -1.9
ATM-217ENST00000531957 HINT3Q9NQE9 182 aaKnown RBP3.18□□□□□ -1.9
ATM-217ENST00000531957 BEX4Q9NWD9 120 aaPredicted RBP3.18□□□□□ -1.9
ATM-217ENST00000531957 ANTXRLA6NF34 631 aa3.17□□□□□ -1.9
ATM-217ENST00000531957 PRSS1P07477 247 aa3.17□□□□□ -1.9
ATM-217ENST00000531957 IRF1P10914 325 aa3.17□□□□□ -1.9
ATM-217ENST00000531957 PSMC2P35998 433 aaKnown RBP3.17□□□□□ -1.9
ATM-217ENST00000531957 METAP2P50579 478 aaKnown RBP eCLIP3.17□□□□□ -1.9
ATM-217ENST00000531957 PDE1BQ01064 536 aa3.17□□□□□ -1.9
ATM-217ENST00000531957 SIRPB2Q5JXA9 342 aa3.17□□□□□ -1.9
ATM-217ENST00000531957 ZNF280DQ6N043 979 aa3.17□□□□□ -1.9
ATM-217ENST00000531957 DUS1LQ6P1R4 473 aaKnown RBP3.17□□□□□ -1.9
ATM-217ENST00000531957 RAD9BQ6WBX8 426 aa3.17□□□□□ -1.9
ATM-217ENST00000531957 ZNF852Q6ZMS4 543 aa3.17□□□□□ -1.9
ATM-217ENST00000531957 HAPLN4Q86UW8 402 aa3.17□□□□□ -1.9
ATM-217ENST00000531957 METTL27Q8N6F8 245 aaPredicted RBP3.17□□□□□ -1.9
ATM-217ENST00000531957 GRAPLQ8TC17 118 aaPredicted RBP3.17□□□□□ -1.9
ATM-217ENST00000531957 ZBTB10Q96DT7 871 aa3.17□□□□□ -1.9
ATM-217ENST00000531957 C1QTNF5Q9BXJ0 243 aa3.17□□□□□ -1.9
ATM-217ENST00000531957 GFRA4Q9GZZ7 299 aa3.17□□□□□ -1.9
ATM-217ENST00000531957 TTC7AQ9ULT0 858 aaPredicted RBP3.17□□□□□ -1.9
ATM-217ENST00000531957 LOXL2Q9Y4K0 774 aa3.17□□□□□ -1.9
ATM-217ENST00000531957 TSPAN4O14817 238 aa3.16□□□□□ -1.9
ATM-217ENST00000531957 SEC14L5O43304 696 aa3.16□□□□□ -1.9
ATM-217ENST00000531957 TBX6O95947 436 aaPredicted RBP3.16□□□□□ -1.9
ATM-217ENST00000531957 FTCDO95954 541 aa3.16□□□□□ -1.9
ATM-217ENST00000531957 RRM1P23921 792 aa3.16□□□□□ -1.9
ATM-217ENST00000531957 CNTFP26441 200 aa3.16□□□□□ -1.9
ATM-217ENST00000531957 PPM1FP49593 454 aaPredicted RBP3.16□□□□□ -1.9
ATM-217ENST00000531957 UFM1P61960 85 aa3.16□□□□□ -1.9
ATM-217ENST00000531957 RPP30P78346 268 aaKnown RBP3.16□□□□□ -1.9
ATM-217ENST00000531957 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.16□□□□□ -1.9
ATM-217ENST00000531957 BIRC3Q13489 604 aa3.16□□□□□ -1.9
ATM-217ENST00000531957 NAE1Q13564 534 aa3.16□□□□□ -1.9
ATM-217ENST00000531957 PDSS1Q5T2R2 415 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms