RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 AEBP2Q6ZN18 517 aaPredicted RBP23.34■■□□□ 1.33
ATM-217ENST00000531957 CHIC1Q5VXU3 224 aa22.21■■□□□ 1.15
ATM-217ENST00000531957 SENP3Q9H4L4 574 aaPredicted RBP20.08■□□□□ 0.81
ATM-217ENST00000531957 PHF23Q9BUL5 403 aaPredicted RBP19.71■□□□□ 0.75
ATM-217ENST00000531957 FOXD1Q16676 465 aa18.61■□□□□ 0.57
ATM-217ENST00000531957 PLPPR3Q6T4P5 718 aa17.77■□□□□ 0.44
ATM-217ENST00000531957 MSH5O43196 834 aa17.58■□□□□ 0.4
ATM-217ENST00000531957 PIAS4Q8N2W9 510 aaPredicted RBP17.45■□□□□ 0.38
ATM-217ENST00000531957 PPP6R1Q9UPN7 881 aa17.27■□□□□ 0.36
ATM-217ENST00000531957 ADRA2BP18089 450 aa17.25■□□□□ 0.35
ATM-217ENST00000531957 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
ATM-217ENST00000531957 SCAF1Q9H7N4 1312 aaKnown RBP15.96■□□□□ 0.15
ATM-217ENST00000531957 DMRT2Q9Y5R5 561 aa15.88■□□□□ 0.13
ATM-217ENST00000531957 MAPK8IP2Q13387 824 aaPredicted RBP15.82■□□□□ 0.12
ATM-217ENST00000531957 PPP4R3CPQ6ZMV5 832 aa15.51■□□□□ 0.07
ATM-217ENST00000531957 CNKSR2Q8WXI2 1034 aa15.28■□□□□ 0.04
ATM-217ENST00000531957 HOXD11P31277 338 aaPredicted RBP15.27■□□□□ 0.04
ATM-217ENST00000531957 DCAF8L1A6NGE4 600 aa15.22■□□□□ 0.03
ATM-217ENST00000531957 RNF216Q9NWF9 866 aaPredicted RBP15.16■□□□□ 0.02
ATM-217ENST00000531957 CACNB1Q02641 598 aaPredicted RBP15.07■□□□□ 0
ATM-217ENST00000531957 NCBP3Q53F19 620 aaKnown RBP14.99□□□□□ -0.01
ATM-217ENST00000531957 RNF39Q9H2S5 420 aa14.92□□□□□ -0.02
ATM-217ENST00000531957 DNAJC5BQ9UF47 199 aa14.83□□□□□ -0.04
ATM-217ENST00000531957 C1QBPQ07021 282 aaKnown RBP14.75□□□□□ -0.05
ATM-217ENST00000531957 NPM3O75607 178 aaKnown RBP14.66□□□□□ -0.06
ATM-217ENST00000531957 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.56□□□□□ -0.082e-8■□□□□ 10.5
ATM-217ENST00000531957 KCNA4P22459 653 aa14.29□□□□□ -0.12
ATM-217ENST00000531957 U3KPZ7 1027 aaPredicted RBP14.21□□□□□ -0.13
ATM-217ENST00000531957 CAPN15O75808 1086 aa14.03□□□□□ -0.16
ATM-217ENST00000531957 APLP2Q06481 763 aa14□□□□□ -0.17
ATM-217ENST00000531957 SLC4A2P04920 1241 aa13.98□□□□□ -0.17
ATM-217ENST00000531957 SPINK5Q9NQ38 1064 aaPredicted RBP13.98□□□□□ -0.17
ATM-217ENST00000531957 DSG3P32926 999 aa13.92□□□□□ -0.18
ATM-217ENST00000531957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.91□□□□□ -0.18
ATM-217ENST00000531957 HNRNPUL2Q1KMD3 747 aaKnown RBP13.91□□□□□ -0.18
ATM-217ENST00000531957 ZNF219Q9P2Y4 722 aaPredicted RBP13.84□□□□□ -0.19
ATM-217ENST00000531957 SAMD1Q6SPF0 538 aaPredicted RBP13.8□□□□□ -0.2
ATM-217ENST00000531957 TRHP20396 242 aaPredicted RBP13.76□□□□□ -0.21
ATM-217ENST00000531957 ABCB7O75027 752 aa13.66□□□□□ -0.22
ATM-217ENST00000531957 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
ATM-217ENST00000531957 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
ATM-217ENST00000531957 POTEHQ6S545 545 aa13.46□□□□□ -0.25
ATM-217ENST00000531957 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
ATM-217ENST00000531957 RBM42Q9BTD8 480 aaKnown RBP13.43□□□□□ -0.26
ATM-217ENST00000531957 POLA2Q14181 598 aa13.36□□□□□ -0.27
ATM-217ENST00000531957 ZBTB12Q9Y330 459 aaPredicted RBP13.25□□□□□ -0.29
ATM-217ENST00000531957 ATF5Q9Y2D1 282 aaPredicted RBP13.18□□□□□ -0.3
ATM-217ENST00000531957 ZBTB22O15209 634 aa13.1□□□□□ -0.31
ATM-217ENST00000531957 ATXN8OSP0DMR3 200 aa13.08□□□□□ -0.32
ATM-217ENST00000531957 CHRDL2Q6WN34 429 aa13.07□□□□□ -0.32
ATM-217ENST00000531957 AKT1S1Q96B36 256 aa13.04□□□□□ -0.32
ATM-217ENST00000531957 OSCARQ8IYS5 282 aa12.97□□□□□ -0.33
ATM-217ENST00000531957 FBLN2P98095 1184 aa12.85□□□□□ -0.35
ATM-217ENST00000531957 REM2Q8IYK8 340 aaPredicted RBP12.85□□□□□ -0.35
ATM-217ENST00000531957 SPDYE2BA6NHP3 402 aa12.77□□□□□ -0.37
ATM-217ENST00000531957 SPDYE6P0CI01 402 aa12.77□□□□□ -0.37
ATM-217ENST00000531957 SPDYE2Q495Y8 402 aa12.77□□□□□ -0.37
ATM-217ENST00000531957 EHMT2Q96KQ7 1210 aa12.76□□□□□ -0.37
ATM-217ENST00000531957 PITPNM1O00562 1244 aa12.74□□□□□ -0.37
ATM-217ENST00000531957 PIP4P2Q8N4L2 257 aa12.71□□□□□ -0.37
ATM-217ENST00000531957 CSRNP3Q8WYN3 585 aa12.69□□□□□ -0.38
ATM-217ENST00000531957 FXR2P51116 673 aaKnown RBP eCLIP12.63□□□□□ -0.39
ATM-217ENST00000531957 SP7Q8TDD2 431 aaPredicted RBP12.61□□□□□ -0.39
ATM-217ENST00000531957 MKRN4PQ13434 485 aaPredicted RBP12.6□□□□□ -0.39
ATM-217ENST00000531957 SPDYE1Q8NFV5 336 aaPredicted RBP12.56□□□□□ -0.4
ATM-217ENST00000531957 SSUH2Q9Y2M2 353 aa12.56□□□□□ -0.4
ATM-217ENST00000531957 ZNF692Q9BU19 519 aaPredicted RBP12.55□□□□□ -0.4
ATM-217ENST00000531957 HAX1O00165 279 aa12.51□□□□□ -0.41
ATM-217ENST00000531957 CLEC11AQ9Y240 323 aa12.49□□□□□ -0.41
ATM-217ENST00000531957 PRKAR2AP13861 404 aaKnown RBP12.41□□□□□ -0.42
ATM-217ENST00000531957 PABPN1Q86U42 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
ATM-217ENST00000531957 PRR29P0C7W0 189 aa12.29□□□□□ -0.44
ATM-217ENST00000531957 C19orf67A6NJJ6 358 aa12.24□□□□□ -0.45
ATM-217ENST00000531957 EVX2Q03828 476 aa12.23□□□□□ -0.45
ATM-217ENST00000531957 CHADLQ6NUI6 762 aa12.2□□□□□ -0.46
ATM-217ENST00000531957 STAG3Q9UJ98 1225 aa12.1□□□□□ -0.47
ATM-217ENST00000531957 FARP1Q9Y4F1 1045 aaPredicted RBP12.07□□□□□ -0.48
ATM-217ENST00000531957 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
ATM-217ENST00000531957 GABBR2O75899 941 aa12.04□□□□□ -0.48
ATM-217ENST00000531957 CD44P16070 742 aaKnown RBP12.04□□□□□ -0.48
ATM-217ENST00000531957 CLCN6P51797 869 aa11.99□□□□□ -0.49
ATM-217ENST00000531957 CREBZFQ9NS37 354 aa11.92□□□□□ -0.5
ATM-217ENST00000531957 ZNF579Q8NAF0 562 aaKnown RBP11.87□□□□□ -0.51
ATM-217ENST00000531957 PAK3O75914 559 aaPredicted RBP11.84□□□□□ -0.51
ATM-217ENST00000531957 ZRANB1Q9UGI0 708 aa11.84□□□□□ -0.51
ATM-217ENST00000531957 NPM1P06748 294 aaKnown RBP eCLIP11.81□□□□□ -0.52
ATM-217ENST00000531957 LHX8Q68G74 356 aa11.8□□□□□ -0.52
ATM-217ENST00000531957 DCBLD2Q96PD2 775 aa11.78□□□□□ -0.52
ATM-217ENST00000531957 PROM2Q8N271 834 aa11.75□□□□□ -0.53
ATM-217ENST00000531957 POTEIP0CG38 1075 aa11.73□□□□□ -0.53
ATM-217ENST00000531957 MNX1P50219 401 aaPredicted RBP11.68□□□□□ -0.54
ATM-217ENST00000531957 GALR2O43603 387 aaPredicted RBP11.65□□□□□ -0.54
ATM-217ENST00000531957 PHF12Q96QT6 1004 aa11.64□□□□□ -0.55
ATM-217ENST00000531957 PLEKHG5O94827 1062 aa11.62□□□□□ -0.55
ATM-217ENST00000531957 FKBP8Q14318 412 aa11.51□□□□□ -0.57
ATM-217ENST00000531957 MS4A3Q96HJ5 214 aa11.5□□□□□ -0.57
ATM-217ENST00000531957 TSPYL2Q9H2G4 693 aaPredicted RBP11.5□□□□□ -0.57
ATM-217ENST00000531957 MIER1Q8N108 512 aa11.48□□□□□ -0.57
ATM-217ENST00000531957 ASTLQ6HA08 431 aaPredicted RBP11.46□□□□□ -0.57
ATM-217ENST00000531957 CCDC61Q9Y6R9 512 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms