RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 RCN3Q96D15 328 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 MPP4Q96JB8 637 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 SNX27Q96L92 541 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 HSFY1Q96LI6 401 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 FAM210AQ96ND0 272 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 KLHL32Q96NJ5 620 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 AGAP3Q96P47 875 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 SLC2A13Q96QE2 648 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 NPY6RQ99463 290 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 LGMNQ99538 433 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 PKP2Q99959 881 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 CLSTN3Q9BQT9 956 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 MLPHQ9BV36 600 aaPredicted RBP7.86□□□□□ -1.15
SPIDR-223ENST00000524033 RHOBTB2Q9BYZ6 727 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 SHCBP1LQ9BZQ2 653 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 CXCL16Q9H2A7 254 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 FAM49BQ9NUQ9 324 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 UTP6Q9NYH9 597 aaKnown RBP7.86□□□□□ -1.15
SPIDR-223ENST00000524033 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.86□□□□□ -1.15
SPIDR-223ENST00000524033 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.86□□□□□ -1.15
SPIDR-223ENST00000524033 GMPR2Q9P2T1 348 aaKnown RBP7.86□□□□□ -1.15
SPIDR-223ENST00000524033 CACNG4Q9UBN1 327 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 SUCOQ9UBS9 1254 aaKnown RBP7.86□□□□□ -1.15
SPIDR-223ENST00000524033 VTI1BQ9UEU0 232 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 PCDHGB4Q9UN71 923 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 RNF11Q9Y3C5 154 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 PCDHGB5Q9Y5G0 923 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 SNX9Q9Y5X1 595 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 PIEZO1Q92508 2521 aa7.86□□□□□ -1.15
SPIDR-223ENST00000524033 NYNRINQ9P2P1 1898 aaKnown RBP7.85□□□□□ -1.15
SPIDR-223ENST00000524033 TCAF2A6NFQ2 919 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 ERI2A8K979 691 aaKnown RBP7.85□□□□□ -1.15
SPIDR-223ENST00000524033 H0Y858 1186 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 SDHDO14521 159 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 TXNDC9O14530 226 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 TRIM24O15164 1050 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 TIMM44O43615 452 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 CACNG3O60359 315 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 NPHS1O60500 1241 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 B3GAT3O94766 335 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 PGM3O95394 542 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 CLPTM1O96005 669 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 CHRNGP07510 517 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 COL6A2P12110 1019 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 ZNF26P17031 533 aaPredicted RBP7.85□□□□□ -1.15
SPIDR-223ENST00000524033 CD68P34810 354 aaPredicted RBP7.85□□□□□ -1.15
SPIDR-223ENST00000524033 MATKP42679 507 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 NUDT2P50583 147 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 INHBCP55103 352 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 MRPS22P82650 360 aaKnown RBP7.85□□□□□ -1.15
SPIDR-223ENST00000524033 SULT2A1Q06520 285 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 SCAPQ12770 1279 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 ELAVL2Q12926 359 aaKnown RBP7.85□□□□□ -1.15
SPIDR-223ENST00000524033 PRKAA1Q13131 559 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 MPP3Q13368 585 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 CYLC2Q14093 348 aaPredicted RBP7.85□□□□□ -1.15
SPIDR-223ENST00000524033 MAP7Q14244 749 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 FLOT2Q14254 428 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 MYBPC3Q14896 1274 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 DLG2Q15700 870 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 ANO4Q32M45 955 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 SLC25A52Q3SY17 297 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 RTP2Q5QGT7 225 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 TSTD2Q5T7W7 516 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 SEL1L3Q68CR1 1132 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 C8orf82Q6P1X6 216 aaPredicted RBP7.85□□□□□ -1.15
SPIDR-223ENST00000524033 CASC4Q6P4E1 433 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 DCLRE1AQ6PJP8 1040 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 DHRS4L2Q6PKH6 230 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 CES3Q6UWW8 571 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 CHSY3Q70JA7 882 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 STRA8Q7Z7C7 330 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 CNTN4Q8IWV2 1026 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 SLC44A3Q8N4M1 653 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 KDM1BQ8NB78 822 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 ACVR1CQ8NER5 493 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 FLCNQ8NFG4 579 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 OR52K1Q8NGK4 314 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 HMGCLL1Q8TB92 370 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 PDCD6IPQ8WUM4 868 aaKnown RBP7.85□□□□□ -1.15
SPIDR-223ENST00000524033 NXPE3Q969Y0 559 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 NTAN1Q96AB6 310 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 HIC2Q96JB3 615 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 VPS39Q96JC1 886 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 HSH2DQ96JZ2 352 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 ZNF597Q96LX8 424 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 DNAI2Q9GZS0 605 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 GBA3Q9H227 469 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 DPEP3Q9H4B8 488 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 WDR41Q9HAD4 459 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 PLEKHA5Q9HAU0 1116 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 NMRAL1Q9HBL8 299 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 ZBTB26Q9HCK0 441 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 NSMCE4AQ9NXX6 385 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 CLIC5Q9NZA1 410 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 HACD3Q9P035 362 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 EPS15L1Q9UBC2 864 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 BCAP29Q9UHQ4 241 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 FBXL21Q9UKT6 434 aa7.85□□□□□ -1.15
SPIDR-223ENST00000524033 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms